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Protein

CAMPATH-1 antigen

Gene

Cd52

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

May play a role in carrying and orienting carbohydrate, as well as having a more specific role.

Names & Taxonomyi

Protein namesi
Recommended name:
CAMPATH-1 antigen
Alternative name(s):
Lymphocyte differentiation antigen B7
CD_antigen: CD52
Gene namesi
Name:Cd52
Synonyms:Cdw52, Rb7
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi620627. Cd52.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
PeptideiPRO_000002091024 – 70CAMPATH-1 antigenAdd BLAST47
PropeptideiPRO_000002091171 – 96Removed in mature formSequence analysisAdd BLAST26

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi26N-linked (GlcNAc...)Sequence analysis1
Lipidationi70GPI-anchor amidated glycineSequence analysis1

Keywords - PTMi

Glycoprotein, GPI-anchor, Lipoprotein

Proteomic databases

PaxDbiQ63064.
PRIDEiQ63064.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000020688.

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

HOGENOMiHOG000111489.
InParanoidiQ63064.
KOiK06488.

Family and domain databases

InterProiIPR026643. CAMPATH-1.
[Graphical view]
PANTHERiPTHR15029. PTHR15029. 2 hits.
PfamiPF15116. CD52. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q63064-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNTFLLLLTI SLLVVVQIQT GDLGQNSTAV TTPANKAATT AAATTKAAAT
60 70 80 90
TATKTTTAVR KTPGKPPKAG ASSITDVGAC TFLFFANTLM CLFYLS
Length:96
Mass (Da):9,829
Last modified:November 1, 1996 - v1
Checksum:iFF195E03287C6FFB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X76697 mRNA. Translation: CAA54126.1.
PIRiI84696. S40081.
RefSeqiNP_446435.1. NM_053983.1.
UniGeneiRn.34155.

Genome annotation databases

GeneIDi117054.
KEGGirno:117054.
UCSCiRGD:620627. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X76697 mRNA. Translation: CAA54126.1.
PIRiI84696. S40081.
RefSeqiNP_446435.1. NM_053983.1.
UniGeneiRn.34155.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000020688.

Proteomic databases

PaxDbiQ63064.
PRIDEiQ63064.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi117054.
KEGGirno:117054.
UCSCiRGD:620627. rat.

Organism-specific databases

CTDi1043.
RGDi620627. Cd52.

Phylogenomic databases

HOGENOMiHOG000111489.
InParanoidiQ63064.
KOiK06488.

Miscellaneous databases

PROiQ63064.

Family and domain databases

InterProiIPR026643. CAMPATH-1.
[Graphical view]
PANTHERiPTHR15029. PTHR15029. 2 hits.
PfamiPF15116. CD52. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCD52_RAT
AccessioniPrimary (citable) accession number: Q63064
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: June 8, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.