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Protein
Submitted name:

Rat alpha-2u-globulin (S type)

Gene
N/A
Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Rat alpha-2u-globulin (S type)Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

SecretedSAAS annotation

Pathology & Biotechi

Protein family/group databases

Allergomei611. Rat n 1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 181162Sequence analysisPRO_5004265645Add
BLAST

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PRIDEiQ63025.

Structurei

3D structure databases

ProteinModelPortaliQ63025.
SMRiQ63025. Positions 20-177.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini35 – 174140Lipocln_cytosolic_FA-bd_domInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the calycin superfamily. Lipocalin family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOVERGENiHBG000215.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR002345. Lipocalin.
IPR022272. Lipocalin_CS.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
IPR002971. Maj_urinary.
[Graphical view]
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR00179. LIPOCALIN.
PR01221. MAJORURINARY.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00213. LIPOCALIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q63025-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLLLLLLCL GLTLVCGHAE EASSTRGNLD VDKLNGDWFS IVVASDKREK
60 70 80 90 100
IEENGSMRVF MQHIDVLENS LGFKFRIKEN GECRELYLVA YKTPEDGEYF
110 120 130 140 150
VEYDGGNTFT ILKTDYDRYV MFHLINFKNG ETFQAMVLYG RTKDLSSDIK
160 170 180
EKFAKLCEAH GITRDNIIDL TKTDHCLQAR G
Length:181
Mass (Da):20,721
Last modified:November 1, 1996 - v1
Checksum:iB882A298950E6D47
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M26838 mRNA. Translation: AAA40642.1.
PIRiI65319.
UniGeneiRn.224459.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M26838 mRNA. Translation: AAA40642.1.
PIRiI65319.
UniGeneiRn.224459.

3D structure databases

ProteinModelPortaliQ63025.
SMRiQ63025. Positions 20-177.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

Allergomei611. Rat n 1.

Proteomic databases

PRIDEiQ63025.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG000215.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR002345. Lipocalin.
IPR022272. Lipocalin_CS.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
IPR002971. Maj_urinary.
[Graphical view]
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR00179. LIPOCALIN.
PR01221. MAJORURINARY.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00213. LIPOCALIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Length polymorphism in the 3' noncoding region of rat hepatic alpha 2u-globulin mRNAs."
    Ichiyoshi Y., Endo H., Yamamoto M.
    Biochim. Biophys. Acta 910:43-51(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ63025_RAT
AccessioniPrimary (citable) accession number: Q63025
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 13, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.