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Q63001 (Q63001_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Integrin alpha-M EMBL AAB03226.1
Gene names
Name:Itgam RGD 2926
OrganismRattus norvegicus (Rat) EMBL AAB03226.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length205 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Molecular functionIntegrin EMBL AAB03226.1
Gene Ontology (GO)
   Biological_processintegrin-mediated signaling pathway

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAB03226.1
Non-terminal residue2051 EMBL AAB03226.1

Sequences

Sequence LengthMass (Da)Tools
Q63001 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: C8C2D9395008DA36

FASTA20522,927
        10         20         30         40         50         60 
VSTVMEQFQK SKTLFSLMQY SDEFRTHFTF NXFKRNPDPK SHVRPIRQLN GRTKTASGIR 

        70         80         90        100        110        120 
KVVRELFQKI NGARDNAAKI LVVITDGEKF GDPLNYEDVI PEAEEAGIIR YVIGVXNAFH 

       130        140        150        160        170        180 
KPQSRRELDT IASKPAGDHV FQVDNFEALN TIRNQLQEKI FAIEGTQTGS TSSFEHEMSQ 

       190        200 
EGFSAAITSN GPLLGXVGXF DWAGG

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References

[1]"Comparative mapping of a hypertension-related region on rat chromosome 1."
Nabika T., Ito T., Kitada H., Serikawa T., Mahimo T., Soubrier F., Julier C., Masuda J., Yamori Y., Nara Y.
Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Wistar Kyoto EMBL AAB03226.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U59801 mRNA. Translation: AAB03226.1.
IPIIPI00199853.
UniGeneRn.54465.

3D structure databases

HSSPHSSP built from PDB template 1BHQ based on UniProtKB P11215.
ModBaseSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000026748.
Q63001.

Proteomic databases

PaxDbQ63001.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

eggNOGNOG301393.
InParanoidQ63001.
OrthoDBEOG4TQM86.

Gene expression databases

GenevestigatorQ63001.

Family and domain databases

InterProIPR002035. VWF_A.
[Graphical view]
PfamPF00092. VWA. 1 hit.
[Graphical view]
SMARTSM00327. VWA. 1 hit.
[Graphical view]
PROSITEPS50234. VWFA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ63001_RAT
AccessionPrimary (citable) accession number: Q63001
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 3, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info