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Q62YB1 (Q62YB1_BACLD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside Hydrolase Family 13 YvdF EMBL AAU22247.1
Gene names
Name:yvdF EMBL AAU22247.1
Ordered Locus Names:BL00497
OrganismBacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP]
Taxonomic identifier279010 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length586 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL AAU22247.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncation binding

Inferred from electronic annotation. Source: InterPro

hydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q62YB1 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: 03070D1F57DEDFD2

FASTA58667,331
        10         20         30         40         50         60 
MEYAAIHHQP FSSDAYSYNG RTLHIKIRTK KDDAEHVRLV WGDPYEYTGG TWKANELAMA 

        70         80         90        100        110        120 
KIAATSTHDY WFAEVAPPFR RLQYGFILTG ADDRDTFYGS NGACPFAGKA ADIGKHCFKF 

       130        140        150        160        170        180 
PFVHEADTFD APDWVKSTVW YQIFPERFAS GREDLSPENA LPWGSKDPEA HDFFGGDLQG 

       190        200        210        220        230        240 
IMDKLDYLED LGVGGIYLTP IFAAPSNHKY DTLDYCSIDP HFGDEELFRT LVSRIHERGM 

       250        260        270        280        290        300 
KIMLDAVFNH IGSASQEWQD VVKNGETSRY KDWFHIHSFP VKEGSYDTFA FTPEMPKLNT 

       310        320        330        340        350        360 
ANPEVQAYLL DIALYWIREF DIDGWRLDVA NEVDHAFWKK FRQAVTAEKP DIFILGEIWH 

       370        380        390        400        410        420 
QADPWLRGDE FHSVMNYPFT EPMIDYFADG SISASQMASR INSHLMSGMK QVNEVMFNLL 

       430        440        450        460        470        480 
DSHDTKRILT RCGGDDKKVR SLLAFMFAQT GSPCIYYGTE VGLDGGDDPL CRKCMVWEEE 

       490        500        510        520        530        540 
KQNQEMLAFM KRLIALRKQE NDVLTYGALE WKLVDDQNDF VSFSRTHEGK ELIYFFHQGS 

       550        560        570        580 
EVRRVRLRDL KIASDKRIYD AWTEEALQHD DVVDIQPGGF FILGAV

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References

[1]"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species."
Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. expand/collapse author list , Galleron N., Ehrlich S.D., Berka R.M.
Genome Biol. 5:R77.1-R77.12(2004) [PubMed: 15461803] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13 / ATCC 14580 [Novozymes].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000002 Genomic DNA. Translation: AAU22247.1.
RefSeqYP_077885.1. NC_006270.3.
YP_090289.1. NC_006322.1.

3D structure databases

ProteinModelPortalQ62YB1.
SMRQ62YB1. Positions 1-584.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ62YB1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000061072; EBBACP00000059505; EBBACG00000061063.
GeneID3031012.
3099225.
GenomeReviewsGene locus BL00497 in contig CP000002_GR.
KEGGbli:BL00497.
PATRIC18946835. VBIBacLic203714_0642.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
GeneTreeEBGT00070000031973.
HOGENOMHBG726713.
OMAETVWYQI.
PhylomeDBQ62YB1.
ProtClustDBCLSK561347.

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004185. Glyco_hydro_13_lg-like_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02903. Alpha-amylase_N. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ62YB1_BACLD
AccessionPrimary (citable) accession number: Q62YB1
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: December 14, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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