Q62XU4 (Q62XU4_BACLD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative Carbohydrate Esterase Family 4 EMBL AAU22414.2

Gene names

Name:	pdaA EMBL AAU22414.2
Ordered Locus Names:	BL03088

Organism

Bacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP]

Taxonomic identifier

279010 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	263 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q62XU4 [UniParc]. Last modified May 29, 2007. Version 2. Checksum: DE502DE5346A7B26	FASTA	263	30,194
	10 20 30 40 50 60 MKRICAICCG FLLTLAFSGN AEAISNKAIH WGFSKSKNHQ PADAGQELTN LLQQYDAFYL 70 80 90 100 110 120 GNTKEKTIYL TFDNGYENGY TPQVLDVLKK QNVKAAFFVT GHFVKDQPEL IKRMAEEGHI 130 140 150 160 170 180 IGNHSYHHPD LTTKTSRVIQ EELESVDEEV YKITGEKNNL YLRPPRGIFS ERVLEETKKL 190 200 210 220 230 240 GYQTVFWSVA FVDWKINAQK GWRYAYDNMM KQAHPGAIYL LHTVSRDNAE ALDQAITDLK 250 260 KEGYTFKSLD DLMFEKSMML ETL

References

[1]

"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species." Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. , Galleron N., Ehrlich S.D., Berka R.M. Genome Biol. 5:R77.1-R77.12(2004) [PubMed: 15461803] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 / ATCC 14580 [Novozymes].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000002 Genomic DNA. Translation: AAU22414.2.
RefSeq	YP_078052.2. NC_006270.3. YP_090455.1. NC_006322.1.
3D structure databases
ProteinModelPortal	Q62XU4.
SMR	Q62XU4. Positions 24-258.
ModBase	Search...
Protein-protein interaction databases
STRING	Q62XU4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBACT00000061690; EBBACP00000060123; EBBACG00000061681.
GeneID	3029640. 3101402.
GenomeReviews	Gene locus BL03088 in contig CP000002_GR.
KEGG	bli:BL03088.
PATRIC	18947189. VBIBacLic203714_0819.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0726.
GeneTree	EBGT00070000031813.
HOGENOM	HBG751163.
OMA	RPPRGIF.
ProtClustDB	CLSK872862.
Family and domain databases
InterPro	IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR002509. Polysac_deacetylase. IPR014235. Spore_PdaA. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 1 hit.
KO	K01567.
Pfam	PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
TIGRFAMs	TIGR02884. Spore_pdaA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q62XU4_BACLD

Accession

Primary (citable) accession number: Q62XU4

Entry history

Integrated into UniProtKB/TrEMBL:	October 25, 2004
Last sequence update:	May 29, 2007
Last modified:	December 14, 2011
This is version 47 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)