Q62K72 (NODI_BURMA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Nod factor export ATP-binding protein I
EC=3.6.3.-

Alternative name(s):
Nodulation ATP-binding protein I

Gene names

Name:	nodI
Ordered Locus Names:	BMA1218

Organism

Burkholderia mallei (strain ATCC 23344) [Complete proteome] [HAMAP]

Taxonomic identifier

243160 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group › Burkholderia mallei

Protein attributes

Sequence length	304 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system By similarity.
Subunit structure	The complex is composed of two ATP-binding proteins (NodI) and two transmembrane proteins (NodJ) Potential.
Subcellular location	Cell inner membrane; Peripheral membrane protein By similarity.
Sequence similarities	Belongs to the ABC transporter superfamily. Lipooligosaccharide exporter (TC 3.A.1.102) family. [View classification] Contains 1 ABC transporter domain.
Sequence caution	The sequence AAU47485.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Biological process	Nodulation Transport
Cellular component	Cell inner membrane Cell membrane Membrane
Ligand	ATP-binding Nucleotide-binding
Molecular function	Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ATP catabolic process Inferred from electronic annotation. Source: GOC nodulation Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATPase activity Inferred from electronic annotation. Source: InterPro transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 304	304	Nod factor export ATP-binding protein I		PRO_0000272596
Regions
	Domain	6 – 236	231	ABC transporter
	Nucleotide binding	38 – 45	8	ATP Potential

Sequences

	Sequence		Length	Mass (Da)
	Q62K72 [UniParc]. Last modified January 23, 2007. Version 2. Checksum: 5FB403EF942E3B6A	FASTA	304	33,833
	10 20 30 40 50 60 MSVAPIDFQQ VEKRYDDKLV VDGLSFHVQP GECFGLLGPN GAGKTTTLKM LLGITHPDAG 70 80 90 100 110 120 SISLCGEPVP SRARHARQRV GVVPQFDNLD PDFTVRENLL VFARYFGLTA HAARALVPPL 130 140 150 160 170 180 LEFAKLESKA DAKVGELSGG MKRRLTLARA LVNDPDVLVL DEPTTGLDPQ ARHLMWERLR 190 200 210 220 230 240 SLLARGKTIL LTTHFMEEAE RLCHRLCVIE EGRKIAEGAP RMLIEAEIGC DVIEIYGPDP 250 260 270 280 290 300 VQLRDELAPF AERTEISGET LFCYVDNPEP IHARLKGRAG LRYLHRPANL EDVFLRLTGR EMLD

References

[1]

"Structural flexibility in the Burkholderia mallei genome." Nierman W.C., DeShazer D., Kim H.S., Tettelin H., Nelson K.E., Feldblyum T.V., Ulrich R.L., Ronning C.M., Brinkac L.M., Daugherty S.C., Davidsen T.D., DeBoy R.T., Dimitrov G., Dodson R.J., Durkin A.S., Gwinn M.L., Haft D.H., Khouri H.M. , Kolonay J.F., Madupu R., Mohammoud Y., Nelson W.C., Radune D., Romero C.M., Sarria S., Selengut J., Shamblin C., Sullivan S.A., White O., Yu Y., Zafar N., Zhou L., Fraser C.M. Proc. Natl. Acad. Sci. U.S.A. 101:14246-14251(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23344.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000010 Genomic DNA. Translation: AAU47485.1. Different initiation.
RefSeq	YP_102897.1. NC_006348.1.
3D structure databases
ProteinModelPortal	Q62K72.
ModBase	Search...
Protein-protein interaction databases
STRING	243160.BMA1218.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAU47485; AAU47485; BMA1218.
GeneID	3089978.
KEGG	bma:BMA1218.
PATRIC	19117454. VBIBurMal55007_1253.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1131.
KO	K09695.
OMA	ASEIGCD.
ProtClustDB	PRK13537.
Family and domain databases
InterPro	IPR003593. AAA+_ATPase. IPR003439. ABC_transporter-like. IPR017871. ABC_transporter_CS. IPR015851. ABC_transpr_NodI. IPR005978. ABC_transptNodI. [Graphical view]
Pfam	PF00005. ABC_tran. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. [Graphical view]
TIGRFAMs	TIGR01288. nodI. 1 hit.
PROSITE	PS00211. ABC_TRANSPORTER_1. 1 hit. PS50893. ABC_TRANSPORTER_2. 1 hit. PS51240. NODI. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

NODI_BURMA

Accession

Primary (citable) accession number: Q62K72

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 23, 2007
Last sequence update:	January 23, 2007
Last modified:	May 1, 2013
This is version 77 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program