Reviewed, UniProtKB/Swiss-Prot Q62K38 (RPIA_BURMA)

Names and origin

Protein names

Recommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	BMA1260

Organism

Burkholderia mallei (Pseudomonas mallei) [Complete proteome] [HAMAP]

Taxonomic identifier

13373 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group

Protein attributes

Sequence length	231 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 231	231	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_0000158401

Sequences

	Sequence		Length	Mass (Da)
	Q62K38-1 [UniParc]. Last modified June 7, 2005. Version 2. Checksum: 1553F33D92550FC2	FASTA	231	24,203
	10 20 30 40 50 60 MTQDELKRLV GEAAARYVTE NVPQGAVIGV GTGSTANCFI DALAAVKDRY RGAVSSSVAT 70 80 90 100 110 120 TERLKSHGIK VFDLNEIESL QVYVDGADEI DGSGAMIKGG GGALTREKIV ASVAETFVCI 130 140 150 160 170 180 ADASKRVAVL GQFPLPVEVV PMARTAIGRR LAALGGVPVL RVKQDGAPYV TDNGNEILDV 190 200 210 220 230 KGLRIDDPRA LEAAINGWPG VVTVGLFAQR GADLCLLGTE RGVETLRYAA H

References

[1]

"Structural flexibility in the Burkholderia mallei genome." Nierman W.C., DeShazer D., Kim H.S., Tettelin H., Nelson K.E., Feldblyum T.V., Ulrich R.L., Ronning C.M., Brinkac L.M., Daugherty S.C., Davidsen T.D., DeBoy R.T., Dimitrov G., Dodson R.J., Durkin A.S., Gwinn M.L., Haft D.H., Khouri H.M. , Kolonay J.F., Madupu R., Mohammoud Y., Nelson W.C., Radune D., Romero C.M., Sarria S., Selengut J., Shamblin C., Sullivan S.A., White O., Yu Y., Zafar N., Zhou L., Fraser C.M. Proc. Natl. Acad. Sci. U.S.A. 101:14246-14251(2004) [PubMed: 15377793] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23344.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000010 Genomic DNA. Translation: AAU47493.1. Different initiation.
RefSeq	YP_102931.1.
3D structure databases
SMR	Q62K38. Positions 1-226.
ModBase	Search...
Genome annotation databases
GeneID	3089810.
GenomeReviews	Gene locus BMA1260 in contig CP000010_GR.
KEGG	bma:BMA1260.
TIGR	BMA1260.
Phylogenomic databases
HOGENOM	HBG515603.
OMA	VFDLNSV.
PhylomeDB	Q62K38.
Enzyme and pathway databases
BRENDA	5.3.1.6. 260531.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. rpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_BURMA

Accession

Primary (citable) accession number: Q62K38

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 7, 2005
Last sequence update:	June 7, 2005
Last modified:	February 9, 2010
This is version 36 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)