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Unreviewed, UniProtKB/TrEMBL Q62GA0 (Q62GA0_BURMA)

Last modified March 2, 2010. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesRecommended name:
Diaminopimelate decarboxylase RuleBase RU003738V4
EC=4.1.1.20 RuleBase RU003738V4
Gene names
Name:lysA EMBL AAU47904.1
Ordered Locus Names:BMA2756
OrganismBurkholderia mallei (Pseudomonas mallei) [Complete proteome] [HAMAP]
Taxonomic identifier13373 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group

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Protein attributes

Sequence length423 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

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General annotation (Comments)

Catalytic activity

Meso-2,6-diaminoheptanedioate = L-lysine + CO2. RuleBase RU003738V4

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU003738V4

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; L-lysine from DL-2,6-diaminopimelate: step 1/1. RuleBase RU003738V4

Sequence similarities

Belongs to the Orn/Lys/Arg decarboxylase class-II family.

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Sequences

Sequence LengthMass (Da)Tools
Q62GA0-1 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: C8B498609408D298

FASTA42345,221
        10         20         30         40         50         60 
MTQAAFDYVD GTLHAERVST VELAERFGTP LFVYSRAALT AAYEAYAKAC AGRRASIHVA 

        70         80         90        100        110        120 
VKANSNLGVL NVFARLGAGF DIVSGGELAR VLAAGGRARD VVFSGVGKSA DEMRVALEAG 

       130        140        150        160        170        180 
VKCFNVESIP ELDRLNAVAA SLGKRAPVSL RVNPDVDPKT HPYISTGLKA NKFGIAFDDA 

       190        200        210        220        230        240 
RATYRAAAAL PNLEVVGIDC HIGSQITELS PYLDAIDKLL DLVERIEADG VQIHHVDVGG 

       250        260        270        280        290        300 
GLGITYDDET PPDIGAYVRA VLARIDARGH GQREIWFEPG RSLTGNAGIL LTRVEFLKQG 

       310        320        330        340        350        360 
EEKNFAIVDA AMNDLARPAM YQAFHAIVPV APRTDVAAAV YDIVGPVCES GDWLGRERSL 

       370        380        390        400        410        420 
AIAPGDLLAI RSAGAYGFTM SSNYNTRPRA AEVIVDGANA HLVRPRETVE SLFEHETILP 


EGR

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000010 Genomic DNA. Translation: AAU47904.1.
RefSeqYP_104274.1.

3D structure databases

SMRQ62GA0. Positions 2-416.
ModBaseSearch...

Genome annotation databases

GeneID3091324.
GenomeReviewsGene locus BMA2756 in contig CP000010_GR.
KEGGbma:BMA2756.
TIGRBMA2756.

Phylogenomic databases

HOGENOMHBG672375.
OMASIAGKCC.
PhylomeDBQ62GA0.
ProtClustDBCLSK897530.

Enzyme and pathway databases

BioCycBMAL243160:BMA_2756-MONOMER.

Family and domain databases

InterProIPR009006. Ala_racemase/Decarboxylase_C.
IPR002986. DAP_decrbxlase.
IPR000183. De-COase2.
[Graphical view]
PfamPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PRINTSPR01181. DAPDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR01048. lysA. 1 hit.
PROSITEPS00879. ODR_DC_2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameQ62GA0_BURMA
AccessionPrimary (citable) accession number: Q62GA0
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: March 2, 2010
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information