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Reviewed, UniProtKB/Swiss-Prot Q62DD0 (TRPC_BURMA)

Last modified November 3, 2009. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Indole-3-glycerol phosphate synthase
      Short name=IGPS
    EC=4.1.1.48
Gene names
Name: trpC
Ordered Locus Names: BMAA0530
OrganismBurkholderia mallei (Pseudomonas mallei) [Complete proteome] [HAMAP]
Taxonomic identifier13373 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group

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Protein attributes

Sequence length261 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

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General annotation (Comments)

Catalytic activity

1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate = 1-C-(3-indolyl)-glycerol 3-phosphate + CO2 + H2O. HAMAP MF_00134

Pathway

Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 4/5. HAMAP MF_00134

Sequence similarities

Belongs to the trpC family.

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 261261Indole-3-glycerol phosphate synthase HAMAP MF_00134
PRO_1000018456

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Sequences

Sequence LengthMass (Da)Tools
Q62DD0-1 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: B72B5A0EA837CB29

FASTA26128,383
        10         20         30         40         50         60 
MSDILDKIIA VKREEIAAAL ESAPLEELKV QASARDSRDF VGALRDKHAA GHAAVIAEVK 

        70         80         90        100        110        120 
KASPSKGVLR EHFVPADIAR SYAQHGAACL SVLTDERFFQ GSARYLEQAR AACTLPVLRK 

       130        140        150        160        170        180 
DFIVDAYQLL EARAMGADAI LLIAAALDTP LMIDLEAYAH SLGLAVLVEV HNRGELDEAL 

       190        200        210        220        230        240 
KLKTPFVGIN NRNLRTFETT IDTTLGMLDA IPDDRIVVTE SGILSRADVE RMEAAGVHTF 

       250        260 
LVGEAFMRAE NPGAELARMF F

« Hide

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Cross-references

Sequence databases

CP000011 Genomic DNA. Translation: AAU46885.1.
RefSeqYP_105298.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3086183.
GenomeReviewsGene locus BMAA0530 in contig CP000011_GR.
KEGGbma:BMAA0530.
TIGRBMAA0530.

Phylogenomic databases

HOGENOMQ62DD0.
OMAPLLCKDF.

Enzyme and pathway databases

BioCycBMAL243160:BMA_A0530-MON.
BRENDA4.1.1.48. 260531.

Family and domain databases

HAMAPMF_00134.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR013798. Indole-3-glycerol_P_synth.
IPR001468. Indole-3-GPS_central.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
PfamPF00218. IGPS. 1 hit.
[Graphical view]
ProDomPD001511. IGPS. 1 hit.
[Graphical view] [Entries sharing at least one domain]
PROSITEPS00614. IGPS. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameTRPC_BURMA
AccessionPrimary (citable) accession number: Q62DD0
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 25, 2004
Last modified: November 3, 2009
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

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Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents