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Q61858

- GPAN1_MOUSE

UniProt

Q61858 - GPAN1_MOUSE

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Protein

G patch domain and ankyrin repeat-containing protein 1

Gene

Gpank1

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. nucleic acid binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
G patch domain and ankyrin repeat-containing protein 1
Alternative name(s):
G5 protein
HLA-B-associated transcript 4
Gene namesi
Name:Gpank1
Synonyms:Bat-4, Bat4, G5
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 17

Organism-specific databases

MGIiMGI:2148975. Gpank1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 372372G patch domain and ankyrin repeat-containing protein 1PRO_0000066973Add
BLAST

Proteomic databases

PaxDbiQ61858.
PRIDEiQ61858.

PTM databases

PhosphoSiteiQ61858.

Expressioni

Gene expression databases

BgeeiQ61858.
CleanExiMM_BAT4.
ExpressionAtlasiQ61858. baseline.
GenevestigatoriQ61858.

Interactioni

Protein-protein interaction databases

IntActiQ61858. 1 interaction.
MINTiMINT-1213044.

Structurei

3D structure databases

ProteinModelPortaliQ61858.
SMRiQ61858. Positions 124-213.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati124 – 15532ANK 1Add
BLAST
Repeati156 – 18631ANK 2Add
BLAST
Domaini271 – 31747G-patchPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 2 ANK repeats.Curated
Contains 1 G-patch domain.PROSITE-ProRule annotation

Keywords - Domaini

ANK repeat, Repeat

Phylogenomic databases

eggNOGiNOG278677.
GeneTreeiENSGT00390000003292.
HOVERGENiHBG031112.
InParanoidiQ61858.
OMAiGVCELGG.
PhylomeDBiQ61858.
TreeFamiTF315384.

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR000467. G_patch_dom.
[Graphical view]
PfamiPF12796. Ank_2. 1 hit.
PF01585. G-patch. 1 hit.
[Graphical view]
SMARTiSM00248. ANK. 1 hit.
SM00443. G_patch. 1 hit.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50174. G_PATCH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q61858-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVGSLACHIL ALPSLHFLVS LTGMSRPSFI EFTPAADSSD LWKDGQQQPQ
60 70 80 90 100
QEKAEPVLDG AAARAFYEAL IADDSSSSKP QRAEPMRERK KKRRRVTREP
110 120 130 140 150
AAAGVPRQGR ALEDEDRMAQ WILLAAQNGD LTELRRLLEP QEAGGAGGNI
160 170 180 190 200
NARDAFWWTP LMCAARAGQG AAVRYLLGRG AAWVGVCDLG GRDAAQLAEE
210 220 230 240 250
AGFPEVARMV RESHGETRSP ENQNRSTPSS SQFCEDCGAH FEDSNHHTST
260 270 280 290 300
AHLLSLSRRP QPSNLPLGVP TSSPGFRLLL RGGWEPGMGL GPRGEGRANP
310 320 330 340 350
IPTILKRDQE GLGYRSPPQP RVTHFAARDT RAVSGRERVP RVATLSQREN
360 370
RRQEEKGRAW ERDLRLYMNL EF
Length:372
Mass (Da):41,011
Last modified:October 25, 2002 - v2
Checksum:i614DD02B0A3A2BAC
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti182 – 1821A → T in AAA88316. (PubMed:9196000)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L76155 mRNA. Translation: AAA88316.1.
AF109719 Genomic DNA. Translation: AAC82476.1.
BC120637 mRNA. Translation: AAI20638.1.
BC120639 mRNA. Translation: AAI20640.1.
CCDSiCCDS28685.1.
RefSeqiNP_001122069.1. NM_001128597.1.
NP_115849.2. NM_032460.2.
UniGeneiMm.7405.

Genome annotation databases

EnsembliENSMUST00000052167; ENSMUSP00000056646; ENSMUSG00000092417.
GeneIDi81845.
KEGGimmu:81845.
UCSCiuc008cfw.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L76155 mRNA. Translation: AAA88316.1 .
AF109719 Genomic DNA. Translation: AAC82476.1 .
BC120637 mRNA. Translation: AAI20638.1 .
BC120639 mRNA. Translation: AAI20640.1 .
CCDSi CCDS28685.1.
RefSeqi NP_001122069.1. NM_001128597.1.
NP_115849.2. NM_032460.2.
UniGenei Mm.7405.

3D structure databases

ProteinModelPortali Q61858.
SMRi Q61858. Positions 124-213.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q61858. 1 interaction.
MINTi MINT-1213044.

PTM databases

PhosphoSitei Q61858.

Proteomic databases

PaxDbi Q61858.
PRIDEi Q61858.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000052167 ; ENSMUSP00000056646 ; ENSMUSG00000092417 .
GeneIDi 81845.
KEGGi mmu:81845.
UCSCi uc008cfw.1. mouse.

Organism-specific databases

CTDi 7918.
MGIi MGI:2148975. Gpank1.

Phylogenomic databases

eggNOGi NOG278677.
GeneTreei ENSGT00390000003292.
HOVERGENi HBG031112.
InParanoidi Q61858.
OMAi GVCELGG.
PhylomeDBi Q61858.
TreeFami TF315384.

Miscellaneous databases

NextBioi 350445.
PROi Q61858.
SOURCEi Search...

Gene expression databases

Bgeei Q61858.
CleanExi MM_BAT4.
ExpressionAtlasi Q61858. baseline.
Genevestigatori Q61858.

Family and domain databases

Gene3Di 1.25.40.20. 1 hit.
InterProi IPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR000467. G_patch_dom.
[Graphical view ]
Pfami PF12796. Ank_2. 1 hit.
PF01585. G-patch. 1 hit.
[Graphical view ]
SMARTi SM00248. ANK. 1 hit.
SM00443. G_patch. 1 hit.
[Graphical view ]
SUPFAMi SSF48403. SSF48403. 1 hit.
PROSITEi PS50297. ANK_REP_REGION. 1 hit.
PS50174. G_PATCH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Localization of the casein kinase II beta-subunit gene within the mouse H-2 complex class III region and comparison of expression with Bat genes."
    Lanning D., Lafuse W.P.
    Mamm. Genome 8:519-521(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: C57BL/6N.
  2. "Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse."
    Xie T., Rowen L., Aguado B., Ahearn M.E., Madan A., Qin S., Campbell R.D., Hood L.
    Genome Res. 13:2621-2636(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 129.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Brain.

Entry informationi

Entry nameiGPAN1_MOUSE
AccessioniPrimary (citable) accession number: Q61858
Secondary accession number(s): Q0VBG8, Q9R065
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 25, 2002
Last sequence update: October 25, 2002
Last modified: October 29, 2014
This is version 111 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3