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Q61858

- GPAN1_MOUSE

UniProt

Q61858 - GPAN1_MOUSE

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Protein
G patch domain and ankyrin repeat-containing protein 1
Gene
Gpank1, Bat-4, Bat4, G5
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. nucleic acid binding Source: InterPro
  2. protein binding Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
G patch domain and ankyrin repeat-containing protein 1
Alternative name(s):
G5 protein
HLA-B-associated transcript 4
Gene namesi
Name:Gpank1
Synonyms:Bat-4, Bat4, G5
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 17

Organism-specific databases

MGIiMGI:2148975. Gpank1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 372372G patch domain and ankyrin repeat-containing protein 1
PRO_0000066973Add
BLAST

Proteomic databases

PaxDbiQ61858.
PRIDEiQ61858.

PTM databases

PhosphoSiteiQ61858.

Expressioni

Gene expression databases

ArrayExpressiQ61858.
BgeeiQ61858.
CleanExiMM_BAT4.
GenevestigatoriQ61858.

Interactioni

Protein-protein interaction databases

IntActiQ61858. 1 interaction.
MINTiMINT-1213044.

Structurei

3D structure databases

ProteinModelPortaliQ61858.
SMRiQ61858. Positions 124-213.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati124 – 15532ANK 1
Add
BLAST
Repeati156 – 18631ANK 2
Add
BLAST
Domaini271 – 31747G-patch
Add
BLAST

Sequence similaritiesi

Contains 2 ANK repeats.
Contains 1 G-patch domain.

Keywords - Domaini

ANK repeat, Repeat

Phylogenomic databases

eggNOGiNOG278677.
GeneTreeiENSGT00390000003292.
HOVERGENiHBG031112.
InParanoidiQ0VBG8.
OMAiGVCELGG.
PhylomeDBiQ61858.
TreeFamiTF315384.

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR000467. G_patch_dom.
[Graphical view]
PfamiPF12796. Ank_2. 1 hit.
PF01585. G-patch. 1 hit.
[Graphical view]
SMARTiSM00248. ANK. 1 hit.
SM00443. G_patch. 1 hit.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50174. G_PATCH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q61858-1 [UniParc]FASTAAdd to Basket

« Hide

MVGSLACHIL ALPSLHFLVS LTGMSRPSFI EFTPAADSSD LWKDGQQQPQ    50
QEKAEPVLDG AAARAFYEAL IADDSSSSKP QRAEPMRERK KKRRRVTREP 100
AAAGVPRQGR ALEDEDRMAQ WILLAAQNGD LTELRRLLEP QEAGGAGGNI 150
NARDAFWWTP LMCAARAGQG AAVRYLLGRG AAWVGVCDLG GRDAAQLAEE 200
AGFPEVARMV RESHGETRSP ENQNRSTPSS SQFCEDCGAH FEDSNHHTST 250
AHLLSLSRRP QPSNLPLGVP TSSPGFRLLL RGGWEPGMGL GPRGEGRANP 300
IPTILKRDQE GLGYRSPPQP RVTHFAARDT RAVSGRERVP RVATLSQREN 350
RRQEEKGRAW ERDLRLYMNL EF 372
Length:372
Mass (Da):41,011
Last modified:October 25, 2002 - v2
Checksum:i614DD02B0A3A2BAC
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti182 – 1821A → T in AAA88316. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L76155 mRNA. Translation: AAA88316.1.
AF109719 Genomic DNA. Translation: AAC82476.1.
BC120637 mRNA. Translation: AAI20638.1.
BC120639 mRNA. Translation: AAI20640.1.
CCDSiCCDS28685.1.
RefSeqiNP_001122069.1. NM_001128597.1.
NP_115849.2. NM_032460.2.
UniGeneiMm.7405.

Genome annotation databases

EnsembliENSMUST00000052167; ENSMUSP00000056646; ENSMUSG00000092417.
GeneIDi81845.
KEGGimmu:81845.
UCSCiuc008cfw.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L76155 mRNA. Translation: AAA88316.1 .
AF109719 Genomic DNA. Translation: AAC82476.1 .
BC120637 mRNA. Translation: AAI20638.1 .
BC120639 mRNA. Translation: AAI20640.1 .
CCDSi CCDS28685.1.
RefSeqi NP_001122069.1. NM_001128597.1.
NP_115849.2. NM_032460.2.
UniGenei Mm.7405.

3D structure databases

ProteinModelPortali Q61858.
SMRi Q61858. Positions 124-213.
ModBasei Search...

Protein-protein interaction databases

IntActi Q61858. 1 interaction.
MINTi MINT-1213044.

PTM databases

PhosphoSitei Q61858.

Proteomic databases

PaxDbi Q61858.
PRIDEi Q61858.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000052167 ; ENSMUSP00000056646 ; ENSMUSG00000092417 .
GeneIDi 81845.
KEGGi mmu:81845.
UCSCi uc008cfw.1. mouse.

Organism-specific databases

CTDi 7918.
MGIi MGI:2148975. Gpank1.

Phylogenomic databases

eggNOGi NOG278677.
GeneTreei ENSGT00390000003292.
HOVERGENi HBG031112.
InParanoidi Q0VBG8.
OMAi GVCELGG.
PhylomeDBi Q61858.
TreeFami TF315384.

Miscellaneous databases

NextBioi 350445.
PROi Q61858.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q61858.
Bgeei Q61858.
CleanExi MM_BAT4.
Genevestigatori Q61858.

Family and domain databases

Gene3Di 1.25.40.20. 1 hit.
InterProi IPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR000467. G_patch_dom.
[Graphical view ]
Pfami PF12796. Ank_2. 1 hit.
PF01585. G-patch. 1 hit.
[Graphical view ]
SMARTi SM00248. ANK. 1 hit.
SM00443. G_patch. 1 hit.
[Graphical view ]
SUPFAMi SSF48403. SSF48403. 1 hit.
PROSITEi PS50297. ANK_REP_REGION. 1 hit.
PS50174. G_PATCH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Localization of the casein kinase II beta-subunit gene within the mouse H-2 complex class III region and comparison of expression with Bat genes."
    Lanning D., Lafuse W.P.
    Mamm. Genome 8:519-521(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: C57BL/6N.
  2. "Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse."
    Xie T., Rowen L., Aguado B., Ahearn M.E., Madan A., Qin S., Campbell R.D., Hood L.
    Genome Res. 13:2621-2636(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 129.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Brain.

Entry informationi

Entry nameiGPAN1_MOUSE
AccessioniPrimary (citable) accession number: Q61858
Secondary accession number(s): Q0VBG8, Q9R065
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 25, 2002
Last sequence update: October 25, 2002
Last modified: July 9, 2014
This is version 109 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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