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Q61858

- GPAN1_MOUSE

UniProt

Q61858 - GPAN1_MOUSE

Protein

G patch domain and ankyrin repeat-containing protein 1

Gene

Gpank1

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 110 (01 Oct 2014)
      Sequence version 2 (25 Oct 2002)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. nucleic acid binding Source: InterPro
    2. protein binding Source: MGI

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    G patch domain and ankyrin repeat-containing protein 1
    Alternative name(s):
    G5 protein
    HLA-B-associated transcript 4
    Gene namesi
    Name:Gpank1
    Synonyms:Bat-4, Bat4, G5
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 17

    Organism-specific databases

    MGIiMGI:2148975. Gpank1.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 372372G patch domain and ankyrin repeat-containing protein 1PRO_0000066973Add
    BLAST

    Proteomic databases

    PaxDbiQ61858.
    PRIDEiQ61858.

    PTM databases

    PhosphoSiteiQ61858.

    Expressioni

    Gene expression databases

    ArrayExpressiQ61858.
    BgeeiQ61858.
    CleanExiMM_BAT4.
    GenevestigatoriQ61858.

    Interactioni

    Protein-protein interaction databases

    IntActiQ61858. 1 interaction.
    MINTiMINT-1213044.

    Structurei

    3D structure databases

    ProteinModelPortaliQ61858.
    SMRiQ61858. Positions 124-213.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Repeati124 – 15532ANK 1Add
    BLAST
    Repeati156 – 18631ANK 2Add
    BLAST
    Domaini271 – 31747G-patchPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 2 ANK repeats.Curated
    Contains 1 G-patch domain.PROSITE-ProRule annotation

    Keywords - Domaini

    ANK repeat, Repeat

    Phylogenomic databases

    eggNOGiNOG278677.
    GeneTreeiENSGT00390000003292.
    HOVERGENiHBG031112.
    InParanoidiQ0VBG8.
    OMAiGVCELGG.
    PhylomeDBiQ61858.
    TreeFamiTF315384.

    Family and domain databases

    Gene3Di1.25.40.20. 1 hit.
    InterProiIPR002110. Ankyrin_rpt.
    IPR020683. Ankyrin_rpt-contain_dom.
    IPR000467. G_patch_dom.
    [Graphical view]
    PfamiPF12796. Ank_2. 1 hit.
    PF01585. G-patch. 1 hit.
    [Graphical view]
    SMARTiSM00248. ANK. 1 hit.
    SM00443. G_patch. 1 hit.
    [Graphical view]
    SUPFAMiSSF48403. SSF48403. 1 hit.
    PROSITEiPS50297. ANK_REP_REGION. 1 hit.
    PS50174. G_PATCH. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q61858-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVGSLACHIL ALPSLHFLVS LTGMSRPSFI EFTPAADSSD LWKDGQQQPQ    50
    QEKAEPVLDG AAARAFYEAL IADDSSSSKP QRAEPMRERK KKRRRVTREP 100
    AAAGVPRQGR ALEDEDRMAQ WILLAAQNGD LTELRRLLEP QEAGGAGGNI 150
    NARDAFWWTP LMCAARAGQG AAVRYLLGRG AAWVGVCDLG GRDAAQLAEE 200
    AGFPEVARMV RESHGETRSP ENQNRSTPSS SQFCEDCGAH FEDSNHHTST 250
    AHLLSLSRRP QPSNLPLGVP TSSPGFRLLL RGGWEPGMGL GPRGEGRANP 300
    IPTILKRDQE GLGYRSPPQP RVTHFAARDT RAVSGRERVP RVATLSQREN 350
    RRQEEKGRAW ERDLRLYMNL EF 372
    Length:372
    Mass (Da):41,011
    Last modified:October 25, 2002 - v2
    Checksum:i614DD02B0A3A2BAC
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti182 – 1821A → T in AAA88316. (PubMed:9196000)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L76155 mRNA. Translation: AAA88316.1.
    AF109719 Genomic DNA. Translation: AAC82476.1.
    BC120637 mRNA. Translation: AAI20638.1.
    BC120639 mRNA. Translation: AAI20640.1.
    CCDSiCCDS28685.1.
    RefSeqiNP_001122069.1. NM_001128597.1.
    NP_115849.2. NM_032460.2.
    UniGeneiMm.7405.

    Genome annotation databases

    EnsembliENSMUST00000052167; ENSMUSP00000056646; ENSMUSG00000092417.
    GeneIDi81845.
    KEGGimmu:81845.
    UCSCiuc008cfw.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L76155 mRNA. Translation: AAA88316.1 .
    AF109719 Genomic DNA. Translation: AAC82476.1 .
    BC120637 mRNA. Translation: AAI20638.1 .
    BC120639 mRNA. Translation: AAI20640.1 .
    CCDSi CCDS28685.1.
    RefSeqi NP_001122069.1. NM_001128597.1.
    NP_115849.2. NM_032460.2.
    UniGenei Mm.7405.

    3D structure databases

    ProteinModelPortali Q61858.
    SMRi Q61858. Positions 124-213.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q61858. 1 interaction.
    MINTi MINT-1213044.

    PTM databases

    PhosphoSitei Q61858.

    Proteomic databases

    PaxDbi Q61858.
    PRIDEi Q61858.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000052167 ; ENSMUSP00000056646 ; ENSMUSG00000092417 .
    GeneIDi 81845.
    KEGGi mmu:81845.
    UCSCi uc008cfw.1. mouse.

    Organism-specific databases

    CTDi 7918.
    MGIi MGI:2148975. Gpank1.

    Phylogenomic databases

    eggNOGi NOG278677.
    GeneTreei ENSGT00390000003292.
    HOVERGENi HBG031112.
    InParanoidi Q0VBG8.
    OMAi GVCELGG.
    PhylomeDBi Q61858.
    TreeFami TF315384.

    Miscellaneous databases

    NextBioi 350445.
    PROi Q61858.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi Q61858.
    Bgeei Q61858.
    CleanExi MM_BAT4.
    Genevestigatori Q61858.

    Family and domain databases

    Gene3Di 1.25.40.20. 1 hit.
    InterProi IPR002110. Ankyrin_rpt.
    IPR020683. Ankyrin_rpt-contain_dom.
    IPR000467. G_patch_dom.
    [Graphical view ]
    Pfami PF12796. Ank_2. 1 hit.
    PF01585. G-patch. 1 hit.
    [Graphical view ]
    SMARTi SM00248. ANK. 1 hit.
    SM00443. G_patch. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48403. SSF48403. 1 hit.
    PROSITEi PS50297. ANK_REP_REGION. 1 hit.
    PS50174. G_PATCH. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Localization of the casein kinase II beta-subunit gene within the mouse H-2 complex class III region and comparison of expression with Bat genes."
      Lanning D., Lafuse W.P.
      Mamm. Genome 8:519-521(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: C57BL/6N.
    2. "Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse."
      Xie T., Rowen L., Aguado B., Ahearn M.E., Madan A., Qin S., Campbell R.D., Hood L.
      Genome Res. 13:2621-2636(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 129.
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Brain.

    Entry informationi

    Entry nameiGPAN1_MOUSE
    AccessioniPrimary (citable) accession number: Q61858
    Secondary accession number(s): Q0VBG8, Q9R065
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 25, 2002
    Last sequence update: October 25, 2002
    Last modified: October 1, 2014
    This is version 110 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3