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Q61324

- ARNT2_MOUSE

UniProt

Q61324 - ARNT2_MOUSE

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Protein

Aryl hydrocarbon receptor nuclear translocator 2

Gene
Arnt2, Kiaa0307
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Specifically recognizes the xenobiotic response element (XRE).

GO - Molecular functioni

  1. aryl hydrocarbon receptor binding Source: UniProtKB
  2. DNA binding Source: MGI
  3. protein heterodimerization activity Source: UniProtKB
  4. sequence-specific DNA binding transcription factor activity Source: UniProtKB
  5. signal transducer activity Source: InterPro

GO - Biological processi

  1. central nervous system development Source: UniProtKB
  2. in utero embryonic development Source: UniProtKB
  3. negative regulation of apoptotic process Source: Ensembl
  4. positive regulation of cell proliferation Source: Ensembl
  5. positive regulation of transcription, DNA-templated Source: UniProtKB
  6. positive regulation of transcription from RNA polymerase II promoter Source: MGI
  7. regulation of transcription, DNA-templated Source: MGI
  8. response to estradiol Source: Ensembl
  9. response to hypoxia Source: UniProtKB
  10. response to toxic substance Source: UniProtKB
  11. response to xenobiotic stimulus Source: UniProtKB
  12. signal transduction Source: UniProtKB
  13. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Aryl hydrocarbon receptor nuclear translocator 2
Short name:
ARNT protein 2
Gene namesi
Name:Arnt2
Synonyms:Kiaa0307
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 7

Organism-specific databases

MGIiMGI:107188. Arnt2.

Subcellular locationi

Nucleus Reviewed prediction

GO - Cellular componenti

  1. cytoplasm Source: InterPro
  2. nucleus Source: UniProtKB
  3. transcription factor complex Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 712712Aryl hydrocarbon receptor nuclear translocator 2PRO_0000127123Add
BLAST

Proteomic databases

PaxDbiQ61324.
PRIDEiQ61324.

PTM databases

PhosphoSiteiQ61324.

Expressioni

Tissue specificityi

Restricted to adult brain and kidney.

Gene expression databases

BgeeiQ61324.
CleanExiMM_ARNT2.
GenevestigatoriQ61324.

Interactioni

Subunit structurei

Efficient DNA binding requires dimerization with another bHLH protein. Heterodimer with the aryl hydrocarbon receptor (AHR) or the SIM1 protein. Interacts with TACC3.1 Publication

Protein-protein interaction databases

IntActiQ61324. 2 interactions.

Structurei

3D structure databases

ProteinModelPortaliQ61324.
SMRiQ61324. Positions 62-439.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini63 – 11654bHLHAdd
BLAST
Domaini134 – 20976PAS 1Add
BLAST
Domaini323 – 39371PAS 2Add
BLAST
Domaini398 – 44144PACAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi73 – 764Poly-Arg
Compositional biasi440 – 4456Poly-Gln
Compositional biasi552 – 5554Poly-Ser

Sequence similaritiesi

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiNOG293303.
GeneTreeiENSGT00650000092935.
HOGENOMiHOG000234380.
HOVERGENiHBG000164.
InParanoidiQ61324.
KOiK15589.
OMAiVCMDMSG.
OrthoDBiEOG7V1FQ8.
PhylomeDBiQ61324.
TreeFamiTF319983.

Family and domain databases

Gene3Di4.10.280.10. 1 hit.
InterProiIPR011598. bHLH_dom.
IPR001067. Nuc_translocat.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00010. HLH. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
PRINTSiPR00785. NCTRNSLOCATR.
SMARTiSM00353. HLH. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 4 hits.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50888. BHLH. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q61324-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MATPAAVNPP EMASDIPGSV ALPVAPMAAT GQVRMAGAMP ARGGKRRSGM    50
DFDDEDGEGP SKFSRENHSE IERRRRNKMT QYITELSDMV PTCSALARKP 100
DKLTILRMAV SHMKSMRGTG NKSTDGAYKP SFLTEQELKH LILEAADGFL 150
FVVAAETGRV IYVSDSVTPV LNQPQSEWFG STLYEQVHPD DVEKLREQLC 200
TSENSMTGRI LDLKTGTVKK EGQQSSMRMC MGSRRSFICR MRCGNAPLDH 250
LPLNRITTMR KRFRNGLGPV KEGEAQYAVV HCTGYIKAWP PAGMTIPEED 300
ADVGQGSKYC LVAIGRLQVT SSPVCMDMSG MSVPTEFLSR HNSDGIITFV 350
DPRCISVIGY QPQDLLGKDI LEFCHPEDQS HLRESFQQVV KLKGQVLSVM 400
YRFRTKNREW LLIRTSSFTF QNPYSDEIEY VICTNTNVKQ LQQQQAELEV 450
HQRDGLSSYD LSQVPVPNLP AGVHEAGKSV EKADAIFSQE RDPRFAEMFA 500
GISASEKKMM SSASASGSQQ IYSQGSPFPA GHSGKAFSSS VVHVPGVNDI 550
QSSSSTGQNI SQISRQLNQG QVAWTGSRPP FPGQPSKTQS SAFGIGSSHP 600
YPADPSSYSP LSSPAASSPS GNAYPSLANR TPGFAESGQS GGQFQGRPSE 650
VWSQWQSQHH GQQSGEQHSH QQPGQTEVFQ DMLPMPGDPT QGTGNYNIED 700
FADLGMFPPF SE 712
Length:712
Mass (Da):77,902
Last modified:February 6, 2007 - v2
Checksum:iFACD27033F7F18DE
GO
Isoform 2 (identifier: Q61324-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-11: Missing.

Show »
Length:701
Mass (Da):76,823
Checksum:i67C24CE8E77A7E59
GO

Sequence cautioni

The sequence BAC41409.1 differs from that shown. Reason: Erroneous initiation.

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 1111Missing in isoform 2. VSP_022689Add
BLAST

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti206 – 2061M → I in BAA09799. 1 Publication
Sequence conflicti432 – 4321I → T in AAH54546. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D63644 mRNA. Translation: BAA09799.1.
AB093225 mRNA. Translation: BAC41409.1. Different initiation.
BC054546 mRNA. Translation: AAH54546.1.
CCDSiCCDS59733.1. [Q61324-1]
RefSeqiNP_031514.3. NM_007488.3. [Q61324-1]
XP_006507303.1. XM_006507240.1. [Q61324-2]
XP_006507304.1. XM_006507241.1. [Q61324-2]
XP_006507305.1. XM_006507242.1. [Q61324-2]
UniGeneiMm.38594.

Genome annotation databases

EnsembliENSMUST00000085077; ENSMUSP00000082154; ENSMUSG00000015709. [Q61324-1]
GeneIDi11864.
KEGGimmu:11864.
UCSCiuc009ief.1. mouse. [Q61324-1]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D63644 mRNA. Translation: BAA09799.1 .
AB093225 mRNA. Translation: BAC41409.1 . Different initiation.
BC054546 mRNA. Translation: AAH54546.1 .
CCDSi CCDS59733.1. [Q61324-1 ]
RefSeqi NP_031514.3. NM_007488.3. [Q61324-1 ]
XP_006507303.1. XM_006507240.1. [Q61324-2 ]
XP_006507304.1. XM_006507241.1. [Q61324-2 ]
XP_006507305.1. XM_006507242.1. [Q61324-2 ]
UniGenei Mm.38594.

3D structure databases

ProteinModelPortali Q61324.
SMRi Q61324. Positions 62-439.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q61324. 2 interactions.

PTM databases

PhosphoSitei Q61324.

Proteomic databases

PaxDbi Q61324.
PRIDEi Q61324.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000085077 ; ENSMUSP00000082154 ; ENSMUSG00000015709 . [Q61324-1 ]
GeneIDi 11864.
KEGGi mmu:11864.
UCSCi uc009ief.1. mouse. [Q61324-1 ]

Organism-specific databases

CTDi 9915.
MGIi MGI:107188. Arnt2.
Rougei Search...

Phylogenomic databases

eggNOGi NOG293303.
GeneTreei ENSGT00650000092935.
HOGENOMi HOG000234380.
HOVERGENi HBG000164.
InParanoidi Q61324.
KOi K15589.
OMAi VCMDMSG.
OrthoDBi EOG7V1FQ8.
PhylomeDBi Q61324.
TreeFami TF319983.

Miscellaneous databases

NextBioi 279871.
PROi Q61324.
SOURCEi Search...

Gene expression databases

Bgeei Q61324.
CleanExi MM_ARNT2.
Genevestigatori Q61324.

Family and domain databases

Gene3Di 4.10.280.10. 1 hit.
InterProi IPR011598. bHLH_dom.
IPR001067. Nuc_translocat.
IPR001610. PAC.
IPR000014. PAS.
IPR013767. PAS_fold.
[Graphical view ]
Pfami PF00010. HLH. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view ]
PRINTSi PR00785. NCTRNSLOCATR.
SMARTi SM00353. HLH. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 2 hits.
[Graphical view ]
SUPFAMi SSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 4 hits.
TIGRFAMsi TIGR00229. sensory_box. 1 hit.
PROSITEi PS50888. BHLH. 1 hit.
PS50112. PAS. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "cDNA cloning and tissue-specific expression of a novel basic helix-loop-helix/PAS factor (Arnt2) with close sequence similarity to the aryl hydrocarbon receptor nuclear translocator (Arnt)."
    Hirose K., Morita M., Ema M., Mimura J., Hamada H., Fujii H., Saijo Y., Gotoh O., Sogawa K., Fujii-Kuriyama Y.
    Mol. Cell. Biol. 16:1706-1713(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
    Strain: C57BL/6J.
    Tissue: Embryo.
  2. "Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
    Okazaki N., Kikuno R., Ohara R., Inamoto S., Hara Y., Nagase T., Ohara O., Koga H.
    DNA Res. 9:179-188(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Tissue: Brain.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Strain: C57BL/6.
    Tissue: Brain.
  4. "Isolation and characterization of AINT: a novel ARNT interacting protein expressed during murine embryonic development."
    Sadek C.M., Jalaguier S., Feeney E.P., Aitola M., Damdimopoulos A.E., Pelto-Huikko M., Gustafsson J.-A.
    Mech. Dev. 97:13-26(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: INTERACTION WITH TACC3.

Entry informationi

Entry nameiARNT2_MOUSE
AccessioniPrimary (citable) accession number: Q61324
Secondary accession number(s): Q7TQG2, Q8CHG9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: February 6, 2007
Last modified: July 9, 2014
This is version 123 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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