ID GATA6_MOUSE Reviewed; 589 AA. AC Q61169; P97729; Q3UQJ2; Q9QZK3; DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot. DT 25-NOV-2008, sequence version 3. DT 24-JAN-2024, entry version 187. DE RecName: Full=Transcription factor GATA-6; DE AltName: Full=GATA-binding factor 6; GN Name=Gata6; OS Mus musculus (Mouse). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. OX NCBI_TaxID=10090; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2). RC TISSUE=Heart; RX PubMed=8660897; DOI=10.1006/dbio.1996.0165; RA Morrisey E.E., Ip H.S., Lu M.M., Parmacek M.S.; RT "GATA-6: a zinc finger transcription factor that is expressed in multiple RT cell lineages derived from lateral mesoderm."; RL Dev. Biol. 177:309-322(1996). RN [2] RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2). RC STRAIN=C57BL/6 X DBA/2; TISSUE=Heart; RA Katsuoka F., Motohashi H., Yamamoto M.; RL Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). RC STRAIN=C57BL/6J; TISSUE=Lung; RX PubMed=16141072; DOI=10.1126/science.1112014; RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J., RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.; RT "The transcriptional landscape of the mammalian genome."; RL Science 309:1559-1563(2005). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.; RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases. RN [5] RP NUCLEOTIDE SEQUENCE [MRNA] OF 384-589 (ISOFORM 1). RC STRAIN=BALB/cJ; TISSUE=Heart; RX PubMed=8812463; DOI=10.1006/geno.1996.0472; RA Narita N., Heikinheimo M., Bielinska M., White R.A., Wilson D.B.; RT "The gene for transcription factor GATA-6 resides on mouse chromosome 18 RT and is expressed in myocardium and vascular smooth muscle."; RL Genomics 36:345-348(1996). RN [6] RP ALTERNATIVE INITIATION. RX PubMed=10608869; DOI=10.1074/jbc.274.53.38004; RA Brewer A., Gove C., Davies A., McNulty C., Barrow D., Koutsourakis M., RA Farzaneh F., Pizzey J., Bomford A., Patient R.; RT "The human and mouse GATA-6 genes utilize two promoters and two initiation RT codons."; RL J. Biol. Chem. 274:38004-38016(1999). RN [7] RP FUNCTION, AND DNA-BINDING. RX PubMed=15329343; DOI=10.1242/dev.01344; RA Lee K.H., Evans S., Ruan T.Y., Lassar A.B.; RT "SMAD-mediated modulation of YY1 activity regulates the BMP response and RT cardiac-specific expression of a GATA4/5/6-dependent chick Nkx2.5 RT enhancer."; RL Development 131:4709-4723(2004). RN [8] RP SUBCELLULAR LOCATION, INTERACTION WITH LMCD1, AND DOMAIN GATA-TYPE RP ZINC-FINGER. RX PubMed=16199866; DOI=10.1128/mcb.25.20.8864-8873.2005; RA Rath N., Wang Z., Lu M.M., Morrisey E.E.; RT "LMCD1/Dyxin is a novel transcriptional cofactor that restricts GATA6 RT function by inhibiting DNA binding."; RL Mol. Cell. Biol. 25:8864-8873(2005). RN [9] RP FUNCTION. RX PubMed=19666519; DOI=10.1073/pnas.0904744106; RA Kodo K., Nishizawa T., Furutani M., Arai S., Yamamura E., Joo K., RA Takahashi T., Matsuoka R., Yamagishi H.; RT "GATA6 mutations cause human cardiac outflow tract defects by disrupting RT semaphorin-plexin signaling."; RL Proc. Natl. Acad. Sci. U.S.A. 106:13933-13938(2009). CC -!- FUNCTION: Transcriptional activator that regulates SEMA3C and PLXNA2 CC (PubMed:19666519). May regulate genes that protect epithelial cells CC from bacterial infection (By similarity). Involved in gene regulation CC specifically in the gastric epithelium (By similarity). Involved in CC bone morphogenetic protein (BMP)-mediated cardiac-specific gene CC expression (PubMed:15329343). Binds to BMP response element (BMPRE) DNA CC sequences within cardiac activating regions (PubMed:15329343). CC {ECO:0000250|UniProtKB:Q92908, ECO:0000269|PubMed:15329343, CC ECO:0000269|PubMed:19666519}. CC -!- SUBUNIT: Interacts with LMCD1. {ECO:0000269|PubMed:16199866}. CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16199866}. CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative initiation; Named isoforms=2; CC Name=1; CC IsoId=Q61169-1; Sequence=Displayed; CC Name=2; CC IsoId=Q61169-2; Sequence=VSP_035779; CC -!- TISSUE SPECIFICITY: Expressed in myocardium, vascular smooth muscle, CC gut epithelium, and osteoclasts. CC -!- DOMAIN: The GATA-type zinc fingers mediate interaction with LMCD1. CC {ECO:0000269|PubMed:16199866}. CC -!- MISCELLANEOUS: [Isoform 2]: Produced by alternative initiation at Met- CC 147 of isoform 1. {ECO:0000305}. CC -!- SEQUENCE CAUTION: CC Sequence=AAB37426.1; Type=Frameshift; Evidence={ECO:0000305}; CC Sequence=AAC52841.1; Type=Frameshift; Evidence={ECO:0000305}; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; S82462; AAB37426.1; ALT_FRAME; mRNA. DR EMBL; AF179425; AAD55267.1; -; mRNA. DR EMBL; AK142381; BAE25049.1; -; mRNA. DR EMBL; CH466592; EDL22985.1; -; Genomic_DNA. DR EMBL; U51335; AAC52841.1; ALT_FRAME; mRNA. DR CCDS; CCDS29059.1; -. [Q61169-1] DR RefSeq; NP_034388.2; NM_010258.3. [Q61169-1] DR AlphaFoldDB; Q61169; -. DR SMR; Q61169; -. DR BioGRID; 199843; 12. DR IntAct; Q61169; 3. DR MINT; Q61169; -. DR STRING; 10090.ENSMUSP00000041774; -. DR iPTMnet; Q61169; -. DR PhosphoSitePlus; Q61169; -. DR MaxQB; Q61169; -. DR PaxDb; 10090-ENSMUSP00000041774; -. DR PeptideAtlas; Q61169; -. DR ProteomicsDB; 271191; -. [Q61169-1] DR ProteomicsDB; 271192; -. [Q61169-2] DR Antibodypedia; 22009; 570 antibodies from 36 providers. DR DNASU; 14465; -. DR Ensembl; ENSMUST00000047762.10; ENSMUSP00000041774.8; ENSMUSG00000005836.11. [Q61169-1] DR GeneID; 14465; -. DR KEGG; mmu:14465; -. DR UCSC; uc008ebj.1; mouse. [Q61169-1] DR AGR; MGI:107516; -. DR CTD; 2627; -. DR MGI; MGI:107516; Gata6. DR VEuPathDB; HostDB:ENSMUSG00000005836; -. DR eggNOG; KOG1601; Eukaryota. DR GeneTree; ENSGT00940000160814; -. DR HOGENOM; CLU_027524_0_0_1; -. DR InParanoid; Q61169; -. DR OMA; ENSMLHC; -. DR OrthoDB; 685518at2759; -. DR PhylomeDB; Q61169; -. DR TreeFam; TF315391; -. DR Reactome; R-MMU-5683826; Surfactant metabolism. DR Reactome; R-MMU-983231; Factors involved in megakaryocyte development and platelet production. DR BioGRID-ORCS; 14465; 4 hits in 83 CRISPR screens. DR PRO; PR:Q61169; -. DR Proteomes; UP000000589; Chromosome 18. DR RNAct; Q61169; Protein. DR Bgee; ENSMUSG00000005836; Expressed in cardiac atrium and 233 other cell types or tissues. DR ExpressionAtlas; Q61169; baseline and differential. DR GO; GO:0031965; C:nuclear membrane; ISO:MGI. DR GO; GO:0005654; C:nucleoplasm; ISO:MGI. DR GO; GO:0005634; C:nucleus; IDA:MGI. DR GO; GO:0005667; C:transcription regulator complex; IDA:MGI. DR GO; GO:0003682; F:chromatin binding; IDA:MGI. DR GO; GO:0000987; F:cis-regulatory region sequence-specific DNA binding; ISO:MGI. DR GO; GO:0003677; F:DNA binding; IDA:MGI. DR GO; GO:0003700; F:DNA-binding transcription factor activity; IDA:MGI. DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IDA:MGI. DR GO; GO:0140297; F:DNA-binding transcription factor binding; ISO:MGI. DR GO; GO:0003690; F:double-stranded DNA binding; ISO:MGI. DR GO; GO:0051525; F:NFAT protein binding; ISO:MGI. DR GO; GO:0019901; F:protein kinase binding; ISO:MGI. DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IDA:MGI. DR GO; GO:0061629; F:RNA polymerase II-specific DNA-binding transcription factor binding; IPI:BHF-UCL. DR GO; GO:0043565; F:sequence-specific DNA binding; IDA:MGI. DR GO; GO:1990837; F:sequence-specific double-stranded DNA binding; ISO:MGI. DR GO; GO:0000976; F:transcription cis-regulatory region binding; ISO:MGI. DR GO; GO:0001223; F:transcription coactivator binding; IPI:BHF-UCL. DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro. DR GO; GO:0048645; P:animal organ formation; IMP:MGI. DR GO; GO:0055007; P:cardiac muscle cell differentiation; IMP:MGI. DR GO; GO:0060038; P:cardiac muscle cell proliferation; IGI:MGI. DR GO; GO:0014898; P:cardiac muscle hypertrophy in response to stress; IMP:MGI. DR GO; GO:0048738; P:cardiac muscle tissue development; IGI:MGI. DR GO; GO:0060947; P:cardiac vascular smooth muscle cell differentiation; ISO:MGI. DR GO; GO:0045165; P:cell fate commitment; IBA:GO_Central. DR GO; GO:0071773; P:cellular response to BMP stimulus; IDA:MGI. DR GO; GO:0071371; P:cellular response to gonadotropin stimulus; IDA:MGI. DR GO; GO:0071456; P:cellular response to hypoxia; ISO:MGI. DR GO; GO:0060486; P:club cell differentiation; IGI:MGI. DR GO; GO:0035987; P:endodermal cell differentiation; IMP:MGI. DR GO; GO:0007493; P:endodermal cell fate determination; IDA:MGI. DR GO; GO:0030855; P:epithelial cell differentiation; IMP:MGI. DR GO; GO:0070315; P:G1 to G0 transition involved in cell differentiation; ISO:MGI. DR GO; GO:0010467; P:gene expression; IMP:MGI. DR GO; GO:0060047; P:heart contraction; IMP:MGI. DR GO; GO:0001701; P:in utero embryonic development; IMP:MGI. DR GO; GO:0060575; P:intestinal epithelial cell differentiation; ISO:MGI. DR GO; GO:0001889; P:liver development; IMP:MGI. DR GO; GO:0060430; P:lung saccule development; IGI:MGI. DR GO; GO:0008584; P:male gonad development; IEA:Ensembl. DR GO; GO:0043066; P:negative regulation of apoptotic process; ISO:MGI. DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; ISO:MGI. DR GO; GO:1902894; P:negative regulation of miRNA transcription; ISO:MGI. DR GO; GO:1904003; P:negative regulation of sebum secreting cell proliferation; ISO:MGI. DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; ISO:MGI. DR GO; GO:0032911; P:negative regulation of transforming growth factor beta1 production; ISO:MGI. DR GO; GO:0032912; P:negative regulation of transforming growth factor beta2 production; ISO:MGI. DR GO; GO:0042475; P:odontogenesis of dentin-containing tooth; IEA:Ensembl. DR GO; GO:0003148; P:outflow tract septum morphogenesis; ISO:MGI. DR GO; GO:0031016; P:pancreas development; IMP:MGI. DR GO; GO:0003310; P:pancreatic A cell differentiation; IMP:MGI. DR GO; GO:0006644; P:phospholipid metabolic process; IGI:MGI. DR GO; GO:0045766; P:positive regulation of angiogenesis; ISO:MGI. DR GO; GO:0043065; P:positive regulation of apoptotic process; ISO:MGI. DR GO; GO:0030513; P:positive regulation of BMP signaling pathway; ISO:MGI. DR GO; GO:0010666; P:positive regulation of cardiac muscle cell apoptotic process; ISO:MGI. DR GO; GO:0060045; P:positive regulation of cardiac muscle cell proliferation; IGI:MGI. DR GO; GO:0110024; P:positive regulation of cardiac muscle myoblast proliferation; ISO:MGI. DR GO; GO:0045893; P:positive regulation of DNA-templated transcription; IDA:MGI. DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:MGI. DR GO; GO:1901390; P:positive regulation of transforming growth factor beta activation; ISO:MGI. DR GO; GO:0002759; P:regulation of antimicrobial humoral response; ISO:MGI. DR GO; GO:0010468; P:regulation of gene expression; IGI:MGI. DR GO; GO:0051591; P:response to cAMP; IEA:Ensembl. DR GO; GO:0043627; P:response to estrogen; IDA:MGI. DR GO; GO:0070848; P:response to growth factor; ISO:MGI. DR GO; GO:0032526; P:response to retinoic acid; ISO:MGI. DR GO; GO:0009636; P:response to toxic substance; IEA:Ensembl. DR GO; GO:0009410; P:response to xenobiotic stimulus; ISO:MGI. DR GO; GO:0001949; P:sebaceous gland cell differentiation; ISO:MGI. DR GO; GO:0003163; P:sinoatrial node development; IMP:MGI. DR GO; GO:0098773; P:skin epidermis development; ISO:MGI. DR GO; GO:0051145; P:smooth muscle cell differentiation; ISO:MGI. DR GO; GO:0048863; P:stem cell differentiation; IMP:MGI. DR GO; GO:0035239; P:tube morphogenesis; IGI:MGI. DR GO; GO:0003309; P:type B pancreatic cell differentiation; IMP:MGI. DR GO; GO:0060510; P:type II pneumocyte differentiation; IGI:MGI. DR CDD; cd00202; ZnF_GATA; 2. DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 2. DR InterPro; IPR008013; GATA_N. DR InterPro; IPR039355; Transcription_factor_GATA. DR InterPro; IPR000679; Znf_GATA. DR InterPro; IPR013088; Znf_NHR/GATA. DR PANTHER; PTHR10071; TRANSCRIPTION FACTOR GATA FAMILY MEMBER; 1. DR PANTHER; PTHR10071:SF23; TRANSCRIPTION FACTOR GATA-6; 1. DR Pfam; PF00320; GATA; 2. DR Pfam; PF05349; GATA-N; 1. DR PRINTS; PR00619; GATAZNFINGER. DR SMART; SM00401; ZnF_GATA; 2. DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 2. DR PROSITE; PS00344; GATA_ZN_FINGER_1; 2. DR PROSITE; PS50114; GATA_ZN_FINGER_2; 2. DR Genevisible; Q61169; MM. PE 1: Evidence at protein level; KW Activator; Alternative initiation; DNA-binding; Isopeptide bond; KW Metal-binding; Nucleus; Phosphoprotein; Reference proteome; Repeat; KW Transcription; Transcription regulation; Ubl conjugation; Zinc; KW Zinc-finger. FT CHAIN 1..589 FT /note="Transcription factor GATA-6" FT /id="PRO_0000083424" FT ZN_FING 384..408 FT /note="GATA-type 1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00094" FT ZN_FING 438..462 FT /note="GATA-type 2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00094" FT REGION 17..62 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 209..274 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 479..534 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 34..49 FT /note="Polar residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 494..534 FT /note="Polar residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT MOD_RES 266 FT /note="Phosphoserine" FT /evidence="ECO:0000250|UniProtKB:Q92908" FT CROSSLNK 423 FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with FT G-Cter in SUMO2)" FT /evidence="ECO:0000250|UniProtKB:Q92908" FT CROSSLNK 467 FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with FT G-Cter in SUMO2)" FT /evidence="ECO:0000250|UniProtKB:Q92908" FT CROSSLNK 478 FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with FT G-Cter in SUMO2)" FT /evidence="ECO:0000250|UniProtKB:Q92908" FT VAR_SEQ 1..146 FT /note="Missing (in isoform 2)" FT /evidence="ECO:0000303|PubMed:8660897, ECO:0000303|Ref.2" FT /id="VSP_035779" FT CONFLICT 297 FT /note="S -> T (in Ref. 1; AAB37426)" FT /evidence="ECO:0000305" FT CONFLICT 416 FT /note="G -> A (in Ref. 5; AAC52841)" FT /evidence="ECO:0000305" FT CONFLICT 536 FT /note="G -> R (in Ref. 5; AAC52841)" FT /evidence="ECO:0000305" FT CONFLICT 538 FT /note="Missing (in Ref. 5; AAC52841)" FT /evidence="ECO:0000305" FT CONFLICT 546 FT /note="N -> K (in Ref. 5; AAC52841)" FT /evidence="ECO:0000305" FT CONFLICT 589 FT /note="A -> V (in Ref. 1; AAB37426 and 2; AAD55267)" FT /evidence="ECO:0000305" SQ SEQUENCE 589 AA; 59307 MW; 1A55474DA65EC6ED CRC64; MALTDGGWCL PKRFGAAAAD AGDSGPFPAR EPSSPLSPIS SSSSSCSRGG DRGPCGASNC RTPQLDAEAV AGPPGRSLLL SPYASHPFAA AHGAAAPGVA GPGSALSTWE DLLLFTDLDQ AATASKLLWS SRGAKLSPFA AEQPEEMYQT LAALSSQGPA AYDGAPGGFV HSAAAAAAAA AAASSPVYVP TTRVGSMLSG LPYLQGAGSG PSNHAGGAGA HPGWSQASAD SPPYGGGGAA GGGAAGPGGA GSATAHASAR FPYSPSPPMA NGAARDPGGY VAAGGTGAGS VSGGGGSLAA MGGREHQYSS LSAARPLNGT YHHHHHHHPT YSPYMAAPLT PAWPAGPFET PVLHSLQGRA GAPLPVPRGP STDLLEDLSE SRECVNCGSI QTPLWRRDGT GHYLCNACGL YSKMNGLSRP LIKPQKRVPS SRRLGLSCAN CHTTTTTLWR RNAEGEPVCN ACGLYMKLHG VPRPLAMKKE GIQTRKRKPK NINKSKACSG NSSGSVPMTP TSSSSNSDDC TKNTSPSTQA TTSGVGASVM SAVGENANPE NSDLKYSGQD GLYIGVSLSS PAEVTSSVRQ DSWCALALA //