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Q60DY1

- BGL21_ORYSJ

UniProt

Q60DY1 - BGL21_ORYSJ

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Protein
Beta-glucosidase 21
Gene
BGLU21, Os05g0366000, LOC_Os05g30300, OsJ_18259, OSJNBa0090H02.7
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei47 – 471Substrate By similarity
Binding sitei147 – 1471Substrate By similarity
Active sitei193 – 1931Proton donor By similarity
Binding sitei336 – 3361Substrate By similarity
Active sitei406 – 4061Nucleophile By similarity
Binding sitei448 – 4481Substrate By similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 21 (EC:3.2.1.21)
Short name:
Os5bglu21
Gene namesi
Name:BGLU21
Ordered Locus Names:Os05g0366000, LOC_Os05g30300
ORF Names:OsJ_18259, OSJNBa0090H02.7
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 5

Organism-specific databases

GrameneiQ60DY1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 Reviewed prediction
Add
BLAST
Chaini26 – 514489Beta-glucosidase 21
PRO_0000390338Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi212 ↔ 220 By similarity
Glycosylationi219 – 2191N-linked (GlcNAc...) Reviewed prediction
Glycosylationi224 – 2241N-linked (GlcNAc...) Reviewed prediction
Glycosylationi407 – 4071N-linked (GlcNAc...) Reviewed prediction
Glycosylationi494 – 4941N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Disulfide bond, Glycoprotein

Structurei

3D structure databases

ProteinModelPortaliQ60DY1.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni455 – 4562Substrate binding By similarity

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
KOiK01188.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q60DY1-1 [UniParc]FASTAAdd to Basket

« Hide

MERPLHLLLV FLSSPWLLLL QGVSSLQFTR DDFPHDFAFG AGTSAYQYEG    50
GAAEDGRTPS IWDTYTHSGR HPEDETGDVA SDGYHKYKED VKLMSEIGLE 100
AYRFTISWSR LIPSGRGAVN LKALQFYNSM INELVKAGIQ IHVVMYHMDL 150
PQSLQDEYGG WISPKIVDDF TAYADVCFRE FGDRVVHWTT VLEPNAMAQA 200
GYDMGILPPN RCSYPFGSNC TAGNSSVEPY LFIHHSLLAH ASAVRLYREK 250
YKVAQKGIIG INIYSMWFYP FTDSAEEIGA TERAKKFIYG WILHPLVFGD 300
YPDTMKKAAG SRLPIFSNHE SEMVTNSFDF IGLNHYSSVY TSNNNNVVKA 350
PLQDLTADVA TLFRVTKNDT PTPVFVPGTI VDPRGLEHAL KYIREKYGNL 400
PIYIQENGSG SSSETLDDVE RINYLAKYIA ATLKAIRSGA NVKGYSMWSF 450
VDLYELFGGY STWHFGLVAV DFDSEKRRRQ PRRSASWYSE FLKNNSVIRV 500
EEDGFVSAAS HAQL 514
Length:514
Mass (Da):57,939
Last modified:December 15, 2009 - v2
Checksum:iEF6595DD53C4E946
GO

Sequence cautioni

The sequence AAV31355.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence BAF17243.2 differs from that shown. Reason: Erroneous gene model prediction.
The sequence EEE63446.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC137618 Genomic DNA. Translation: AAV31355.1. Sequence problems.
AP008211 Genomic DNA. Translation: BAF17243.2. Sequence problems.
CM000142 Genomic DNA. Translation: EEE63446.1. Sequence problems.
RefSeqiNP_001055329.2. NM_001061864.2.
UniGeneiOs.80244.

Genome annotation databases

EnsemblPlantsiOS05T0366000-00; OS05T0366000-00; OS05G0366000.
GeneIDi4338558.
KEGGiosa:4338558.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC137618 Genomic DNA. Translation: AAV31355.1 . Sequence problems.
AP008211 Genomic DNA. Translation: BAF17243.2 . Sequence problems.
CM000142 Genomic DNA. Translation: EEE63446.1 . Sequence problems.
RefSeqi NP_001055329.2. NM_001061864.2.
UniGenei Os.80244.

3D structure databases

ProteinModelPortali Q60DY1.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS05T0366000-00 ; OS05T0366000-00 ; OS05G0366000 .
GeneIDi 4338558.
KEGGi osa:4338558.

Organism-specific databases

Gramenei Q60DY1.

Phylogenomic databases

eggNOGi COG2723.
KOi K01188.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  5. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL21_ORYSJ
AccessioniPrimary (citable) accession number: Q60DY1
Secondary accession number(s): Q0DIT0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: December 15, 2009
Last modified: February 19, 2014
This is version 63 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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