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Q60DY1

- BGL21_ORYSJ

UniProt

Q60DY1 - BGL21_ORYSJ

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Protein

Beta-glucosidase 21

Gene

BGLU21

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei47 – 471SubstrateBy similarity
Binding sitei147 – 1471SubstrateBy similarity
Active sitei193 – 1931Proton donorBy similarity
Binding sitei336 – 3361SubstrateBy similarity
Active sitei406 – 4061NucleophileBy similarity
Binding sitei448 – 4481SubstrateBy similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 21 (EC:3.2.1.21)
Short name:
Os5bglu21
Gene namesi
Name:BGLU21
Ordered Locus Names:Os05g0366000, LOC_Os05g30300
ORF Names:OsJ_18259, OSJNBa0090H02.7
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 5

Organism-specific databases

GrameneiQ60DY1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525Sequence AnalysisAdd
BLAST
Chaini26 – 514489Beta-glucosidase 21PRO_0000390338Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi212 ↔ 220By similarity
Glycosylationi219 – 2191N-linked (GlcNAc...)Sequence Analysis
Glycosylationi224 – 2241N-linked (GlcNAc...)Sequence Analysis
Glycosylationi407 – 4071N-linked (GlcNAc...)Sequence Analysis
Glycosylationi494 – 4941N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Structurei

3D structure databases

ProteinModelPortaliQ60DY1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni455 – 4562Substrate bindingBy similarity

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
InParanoidiQ60DY1.
KOiK01188.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q60DY1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MERPLHLLLV FLSSPWLLLL QGVSSLQFTR DDFPHDFAFG AGTSAYQYEG
60 70 80 90 100
GAAEDGRTPS IWDTYTHSGR HPEDETGDVA SDGYHKYKED VKLMSEIGLE
110 120 130 140 150
AYRFTISWSR LIPSGRGAVN LKALQFYNSM INELVKAGIQ IHVVMYHMDL
160 170 180 190 200
PQSLQDEYGG WISPKIVDDF TAYADVCFRE FGDRVVHWTT VLEPNAMAQA
210 220 230 240 250
GYDMGILPPN RCSYPFGSNC TAGNSSVEPY LFIHHSLLAH ASAVRLYREK
260 270 280 290 300
YKVAQKGIIG INIYSMWFYP FTDSAEEIGA TERAKKFIYG WILHPLVFGD
310 320 330 340 350
YPDTMKKAAG SRLPIFSNHE SEMVTNSFDF IGLNHYSSVY TSNNNNVVKA
360 370 380 390 400
PLQDLTADVA TLFRVTKNDT PTPVFVPGTI VDPRGLEHAL KYIREKYGNL
410 420 430 440 450
PIYIQENGSG SSSETLDDVE RINYLAKYIA ATLKAIRSGA NVKGYSMWSF
460 470 480 490 500
VDLYELFGGY STWHFGLVAV DFDSEKRRRQ PRRSASWYSE FLKNNSVIRV
510
EEDGFVSAAS HAQL
Length:514
Mass (Da):57,939
Last modified:December 15, 2009 - v2
Checksum:iEF6595DD53C4E946
GO

Sequence cautioni

The sequence AAV31355.1 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence BAF17243.2 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence EEE63446.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC137618 Genomic DNA. Translation: AAV31355.1. Sequence problems.
AP008211 Genomic DNA. Translation: BAF17243.2. Sequence problems.
CM000142 Genomic DNA. Translation: EEE63446.1. Sequence problems.
RefSeqiNP_001055329.2. NM_001061864.2.
UniGeneiOs.80244.

Genome annotation databases

EnsemblPlantsiOS05T0366000-00; OS05T0366000-00; OS05G0366000.
GeneIDi4338558.
KEGGiosa:4338558.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC137618 Genomic DNA. Translation: AAV31355.1 . Sequence problems.
AP008211 Genomic DNA. Translation: BAF17243.2 . Sequence problems.
CM000142 Genomic DNA. Translation: EEE63446.1 . Sequence problems.
RefSeqi NP_001055329.2. NM_001061864.2.
UniGenei Os.80244.

3D structure databases

ProteinModelPortali Q60DY1.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS05T0366000-00 ; OS05T0366000-00 ; OS05G0366000 .
GeneIDi 4338558.
KEGGi osa:4338558.

Organism-specific databases

Gramenei Q60DY1.

Phylogenomic databases

eggNOGi COG2723.
InParanoidi Q60DY1.
KOi K01188.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  5. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL21_ORYSJ
AccessioniPrimary (citable) accession number: Q60DY1
Secondary accession number(s): Q0DIT0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: December 15, 2009
Last modified: October 29, 2014
This is version 65 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3