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Protein
Submitted name:

MYB-1b

Gene

Ybx1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
MYB-1bImported
Gene namesi
Name:Ybx1Imported
Synonyms:Nsep1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:99146. Ybx1.

PTM / Processingi

Proteomic databases

PaxDbiQ60951.
PeptideAtlasiQ60951.
PRIDEiQ60951.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini58 – 126CSPInterPro annotationAdd BLAST69

Phylogenomic databases

eggNOGiKOG3070. Eukaryota.
COG1278. LUCA.
HOVERGENiHBG008757.

Family and domain databases

CDDicd04458. CSP_CDS. 1 hit.
InterProiView protein in InterPro
IPR019844. Cold-shock_CS.
IPR011129. CSD.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
PfamiView protein in Pfam
PF00313. CSD. 1 hit.
PRINTSiPR00050. COLDSHOCK.
SMARTiView protein in SMART
SM00357. CSP. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiView protein in PROSITE
PS00352. COLD_SHOCK. 1 hit.

Sequencei

Sequence statusi: Complete.

Q60951-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSEAETQQP PAAPAAALSA ADTKPGSTGS GAGSGGPGGL TSAAPAGGDK
60 70 80 90 100
KVIATKVLGT VKWFNVRNGY GFINRNDTKE DVFVHQTAIK KNNPRKYLRS
110 120 130 140 150
VGDGETVEFD VVEGEKGAEA ANVTGPGGVP VQGSKYAADR NHYRRYPRRR
160 170 180 190 200
GPPRNYQQNY QNSESGEKNE GSESAPEGQA QQRRPYRRRR FPPCYMRRPY
210 220 230 240 250
ARRPQYSNPP VQGEVMEGAD NQGAGEQGRP VRQNMYWGYR PRFRRGPPRQ
260 270 280 290 300
RQPREDGNEE DKENQGDETQ GQQPPQRRYR RNFNYRRRRP ENPKPQDGKE
310 320
TKAADPPAEN SSAPEAEQGG AE
Length:322
Mass (Da):35,700
Last modified:November 1, 1996 - v1
Checksum:i3F216C42CA1671BB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U33197 mRNA. Translation: AAA75476.1.
UniGeneiMm.258204.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ60951_MOUSE
AccessioniPrimary (citable) accession number: Q60951
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 5, 2017
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)