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Q608L5

- GLGB_METCA

UniProt

Q608L5 - GLGB_METCA

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene
glgB, MCA1475
Organism
Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei409 – 4091Nucleophile By similarity
Active sitei462 – 4621Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:MCA1475
OrganismiMethylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
Taxonomic identifieri243233 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaMethylococcalesMethylococcaceaeMethylococcus
ProteomesiUP000006821: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7407401,4-alpha-glucan branching enzyme GlgBUniRule annotationPRO_0000188715Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi243233.MCA1475.

Structurei

3D structure databases

ProteinModelPortaliQ608L5.
SMRiQ608L5. Positions 118-726.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q608L5-1 [UniParc]FASTAAdd to Basket

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MTDSSTLAEL SPDFQRIVEA RHHDPFAVLG RHRRDNRDLI RAFLPQAEEV    50
RVGSAGRVME RIAGTAIFEC EVEAETTDLH YRLYWTDQTG QTHSFIDPYT 100
FPPRLSDFDL YLFGEGRHWN IYRVLGAHPH SVDGIDGILF ATWAPNAERI 150
SVVGEFNGWD GRRHPMRVRG ASGVWELFIP ELQPGLLYKF EIRNRAHGTI 200
HLKSDPYGRQ FELRPNTASI ITRESGYAWN DADWLAQRKD WPWLHRPLSV 250
YEMHAGSWKR DLEGGYLNYR DLAHELVDYV KSAGFSHIEL MPVTEHPLDA 300
SWGYQTTGYF APTSRFGTPD DFRYFVDHCH RNGIGVILDW VPAHFPKDAH 350
GLARFDGTAL YEHEDPRLGE HRDWGTLIYN YGRNEVKNFL LGSALFWLEE 400
FHLDGLRVDA VASMLYLDYS RQPGDWIPNK YGGNENLEAI AFLRDLNTVV 450
HQQFPGVLVI AEESTAWPQV TRPTWTGGLG FSMKWNMGWM HDILVYMGKD 500
PVHRHYHHDQ LTFGLLYAFT ENFVLPFSHD EVVHGKGSML AKMPGDEWRR 550
FANLRVLYTM MFTYPGKKLL FMGCEFAQTG EWNHTTALDW PLLESNLHKG 600
VLHLVSDLNR LYQSTSALYA YDFESQGFEW IDSHDAAQSV ISYVRRDDDS 650
HVVVVLNFTP VPRHNYRIGV PEPVGYREVF NSDAECYGGA NLGNWEIKTE 700
SVEWMGRAQS VVLTLPPLAG IVLAPVAPSA TPDCGTPGDE 740
Length:740
Mass (Da):84,735
Last modified:November 23, 2004 - v1
Checksum:i872F7568D25B2D0B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017282 Genomic DNA. Translation: AAU92509.1.
RefSeqiYP_113932.1. NC_002977.6.

Genome annotation databases

EnsemblBacteriaiAAU92509; AAU92509; MCA1475.
GeneIDi3103570.
KEGGimca:MCA1475.
PATRICi22606786. VBIMetCap22254_1505.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017282 Genomic DNA. Translation: AAU92509.1 .
RefSeqi YP_113932.1. NC_002977.6.

3D structure databases

ProteinModelPortali Q608L5.
SMRi Q608L5. Positions 118-726.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243233.MCA1475.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAU92509 ; AAU92509 ; MCA1475 .
GeneIDi 3103570.
KEGGi mca:MCA1475.
PATRICi 22606786. VBIMetCap22254_1505.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33009 / NCIMB 11132 / Bath.

Entry informationi

Entry nameiGLGB_METCA
AccessioniPrimary (citable) accession number: Q608L5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: November 23, 2004
Last modified: June 11, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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