Reviewed, UniProtKB/Swiss-Prot Q608L4 (GLGA1_METCA)

Names and origin

Protein names

Recommended name:
    Glycogen synthase 1
    EC=2.4.1.21
Alternative name(s):
    Starch [bacterial glycogen] synthase 1

Gene names

Name:	glgA1
Ordered Locus Names:	MCA1476

Organism

Methylococcus capsulatus [Complete proteome] [HAMAP]

Taxonomic identifier

414 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Methylococcales › Methylococcaceae › Methylococcus

Protein attributes

Sequence length	493 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose. HAMAP MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 493	493	Glycogen synthase 1 HAMAP MF_00484		PRO_0000230245
Sites
	Binding site	15	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q608L4-1 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 2180CEFF91B11266	FASTA	493	53,815
	10 20 30 40 50 60 MKILFVSSEV FPLMKTGGLA DVSGSLPAAL SALGHDVRIL MPAYPEAISA AETPNALSLR 70 80 90 100 110 120 QAGSQLTLLS TRLPGTTVPL WLLDAPASFG RFGNPYLAPN GAPWPDNAER FALLARVAVD 130 140 150 160 170 180 LTQDRLGLGW KPDVVHCNDW QTGLIPPLLS DEPNRPAVVF TVHNLAYQGL FPYETFQRLA 190 200 210 220 230 240 LPPRLWKMEA LEFYGQLSFI KGGLVFADRI NTVSPSYAEE IQTPEFGCGL DGLLRSRKSC 250 260 270 280 290 300 LSGILNGIDD VAWNPATDPY LPAPYGPDTL ERKKVNRTVL RQRYGLPDDP EVAVLGMVGR 310 320 330 340 350 360 MVEQKGVDLL IDILDDLLQL PVQLVVLGSG DKEFERCFER AAAARPERIA VTIGYDEPLA 370 380 390 400 410 420 HLIEAGADIF LMPSRFEPCG LNQLYSQRYG TVPIVRKVGG LADTVEDATP ERLAAGQASG 430 440 450 460 470 480 IVFEPAKPAF LLEAVYRALA LYREPEVWRA VCKCGMAKDF SWRKSASRYV GLYREALAGM 490 NAGCSIADPR CAA

References

[1]

"Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath)." Ward N.L., Larsen O., Sakwa J., Bruseth L., Khouri H.M., Durkin A.S., Dimitrov G., Jiang L., Scanlan D., Kang K.H., Lewis M.R., Nelson K.E., Methe B.A., Wu M., Heidelberg J.F., Paulsen I.T., Fouts D.E., Ravel J. , Tettelin H., Ren Q., Read T.D., DeBoy R.T., Seshadri R., Salzberg S.L., Jensen H.B., Birkeland N.K., Nelson W.C., Dodson R.J., Grindhaug S.H., Holt I.E., Eidhammer I., Jonasen I., Vanaken S., Utterback T.R., Feldblyum T.V., Fraser C.M., Lillehaug J.R., Eisen J.A. PLoS Biol. 2:1616-1628(2004) [PubMed: 15383840] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bath / NCIMB 11132.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE017282 Genomic DNA. Translation: AAU92508.1.
RefSeq	YP_113933.1.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Genome annotation databases
GeneID	3104785.
GenomeReviews	Gene locus MCA1476 in contig AE017282_GR.
KEGG	mca:MCA1476.
NMPDR	fig|243233.4.peg.912.
TIGR	MCA1476.
Phylogenomic databases
HOGENOM	Q608L4.
OMA	YQGPWRW.
Enzyme and pathway databases
BioCyc	MCAP243233:MCA_1476-MON.
BRENDA	2.4.1.21. 2172.
Family and domain databases
HAMAP	MF_00484. [Tree]
InterPro	IPR011835. GlgA. IPR001296. Glyco_trans_1. IPR013534. Glyco_transf_5. [Graphical view]
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. glgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA1_METCA

Accession

Primary (citable) accession number: Q608L4

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 4, 2006
Last sequence update:	November 23, 2004
Last modified:	November 3, 2009
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)