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Q60846

- TNR8_MOUSE

UniProt

Q60846 - TNR8_MOUSE

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Protein

Tumor necrosis factor receptor superfamily member 8

Gene
Tnfrsf8
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Receptor for TNFSF8/CD30L. May play a role in the regulation of cellular growth and transformation of activated lymphoblasts. Regulates gene expression through activation of NF-kappa-B By similarity.

GO - Molecular functioni

  1. transmembrane signaling receptor activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Receptor

Names & Taxonomyi

Protein namesi
Recommended name:
Tumor necrosis factor receptor superfamily member 8
Alternative name(s):
CD30L receptor
Lymphocyte activation antigen CD30
CD_antigen: CD30
Gene namesi
Name:Tnfrsf8
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 4

Organism-specific databases

MGIiMGI:99908. Tnfrsf8.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini19 – 258240Extracellular Reviewed predictionAdd
BLAST
Transmembranei259 – 27921Helical; Reviewed predictionAdd
BLAST
Topological domaini280 – 498219Cytoplasmic Reviewed predictionAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818 Reviewed predictionAdd
BLAST
Chaini19 – 498480Tumor necrosis factor receptor superfamily member 8PRO_0000034575Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi29 ↔ 44 By similarity
Disulfide bondi45 ↔ 58 By similarity
Disulfide bondi48 ↔ 65 By similarity
Disulfide bondi69 ↔ 81 By similarity
Disulfide bondi84 ↔ 97 By similarity
Disulfide bondi87 ↔ 105 By similarity
Disulfide bondi107 ↔ 121 By similarity
Disulfide bondi128 ↔ 146 By similarity
Glycosylationi156 – 1561N-linked (GlcNAc...) Reviewed prediction
Glycosylationi183 – 1831N-linked (GlcNAc...) Reviewed prediction
Glycosylationi229 – 2291N-linked (GlcNAc...) Reviewed prediction
Modified residuei353 – 3531Phosphoserine By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein, Phosphoprotein

Proteomic databases

PRIDEiQ60846.

PTM databases

PhosphoSiteiQ60846.

Expressioni

Tissue specificityi

Detected in thymus and in activated splenocytes.

Inductioni

By concanavalin A and pokeweed mitogen in splenocytes.

Gene expression databases

ArrayExpressiQ60846.
BgeeiQ60846.
GenevestigatoriQ60846.

Interactioni

Subunit structurei

Interacts with TRAF1, TRAF2, TRAF3 and TRAF5 By similarity.

Structurei

3D structure databases

ProteinModelPortaliQ60846.
SMRiQ60846. Positions 29-185.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati28 – 6639TNFR-Cys 1Add
BLAST
Repeati68 – 10639TNFR-Cys 2Add
BLAST
Repeati107 – 15044TNFR-Cys 3Add
BLAST

Sequence similaritiesi

Contains 3 TNFR-Cys repeats.

Keywords - Domaini

Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG45191.
GeneTreeiENSGT00510000049215.
HOGENOMiHOG000220871.
HOVERGENiHBG005054.
InParanoidiQ60846.
KOiK05145.
OMAiVEKTPCA.
OrthoDBiEOG786H2Q.
PhylomeDBiQ60846.
TreeFamiTF331157.

Family and domain databases

InterProiIPR001368. TNFR/NGFR_Cys_rich_reg.
IPR020416. TNFR_8.
[Graphical view]
PfamiPF00020. TNFR_c6. 1 hit.
[Graphical view]
PRINTSiPR01923. TNFACTORR8.
SMARTiSM00208. TNFR. 3 hits.
[Graphical view]
PROSITEiPS00652. TNFR_NGFR_1. 1 hit.
PS50050. TNFR_NGFR_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q60846-1 [UniParc]FASTAAdd to Basket

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MSALLTAAGL LFLGMLQAFP TDRPLKTTCA GDLSHYPGEA ARNCCYQCPS    50
GLSPTQPCPR GPAHCRKQCA PDYYVNEDGK CTACVTCLPG LVEKAPCSGN 100
SPRICECQPG MHCCTPAVNS CARCKLHCSG EEVVKSPGTA KKDTICELPS 150
SGSGPNCSNP GDRKTLTSHA TPQAMPTLES PANDSARSLL PMRVTNLVQE 200
DATELVKVPE SSSSKAREPS PDPGNAEKNM TLELPSPGTL PDISTSENSK 250
EPASTASTLS LVVDAWTSSR MQPTSPLSTG TPFLDPGPVL FWVAMVVLLV 300
GSGSFLLCYW KACRRRFQQK FHLDYLVQTF QPKMEQTDSC PTEKLTQPQR 350
SGSVTDPSTG HKLSPVSPPP AVETCASVGA TYLENLPLLD DSPAGNPFSP 400
REPPEPRVST EHTNNRIEKI YIMKADTVIV GSVKTEVPEG RAPAGSTESE 450
LEAELEVDHA PHYPEQETEP PLGSCTEVMF SVEEGGKEDH GPTTVSEK 498
Length:498
Mass (Da):53,216
Last modified:November 1, 1996 - v1
Checksum:i98CA2A05B38AFA71
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U25416 mRNA. Translation: AAA92887.1.
CCDSiCCDS18915.1.
RefSeqiNP_033427.1. NM_009401.2.
UniGeneiMm.12810.

Genome annotation databases

EnsembliENSMUST00000030339; ENSMUSP00000030339; ENSMUSG00000028602.
GeneIDi21941.
KEGGimmu:21941.
UCSCiuc008vrv.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U25416 mRNA. Translation: AAA92887.1 .
CCDSi CCDS18915.1.
RefSeqi NP_033427.1. NM_009401.2.
UniGenei Mm.12810.

3D structure databases

ProteinModelPortali Q60846.
SMRi Q60846. Positions 29-185.
ModBasei Search...
MobiDBi Search...

PTM databases

PhosphoSitei Q60846.

Proteomic databases

PRIDEi Q60846.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000030339 ; ENSMUSP00000030339 ; ENSMUSG00000028602 .
GeneIDi 21941.
KEGGi mmu:21941.
UCSCi uc008vrv.1. mouse.

Organism-specific databases

CTDi 943.
MGIi MGI:99908. Tnfrsf8.

Phylogenomic databases

eggNOGi NOG45191.
GeneTreei ENSGT00510000049215.
HOGENOMi HOG000220871.
HOVERGENi HBG005054.
InParanoidi Q60846.
KOi K05145.
OMAi VEKTPCA.
OrthoDBi EOG786H2Q.
PhylomeDBi Q60846.
TreeFami TF331157.

Miscellaneous databases

NextBioi 301572.
PROi Q60846.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q60846.
Bgeei Q60846.
Genevestigatori Q60846.

Family and domain databases

InterProi IPR001368. TNFR/NGFR_Cys_rich_reg.
IPR020416. TNFR_8.
[Graphical view ]
Pfami PF00020. TNFR_c6. 1 hit.
[Graphical view ]
PRINTSi PR01923. TNFACTORR8.
SMARTi SM00208. TNFR. 3 hits.
[Graphical view ]
PROSITEi PS00652. TNFR_NGFR_1. 1 hit.
PS50050. TNFR_NGFR_2. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Structure and expression of murine CD30 and its role in cytokine production."
    Bowen M.A., Lee R.K., Miragliotta G., Nam S.Y., Podack E.R.
    J. Immunol. 156:442-449(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: BALB/c.
    Tissue: Splenocyte.

Entry informationi

Entry nameiTNR8_MOUSE
AccessioniPrimary (citable) accession number: Q60846
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 27, 2002
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi