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Q607P2 (TYPH_METCA) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Putative thymidine phosphorylase

EC=2.4.2.4
Alternative name(s):
TdRPase
Gene names
Ordered Locus Names:MCA1717
OrganismMethylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) [Complete proteome] [HAMAP]
Taxonomic identifier243233 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaMethylococcalesMethylococcaceaeMethylococcus

Protein attributes

Sequence length516 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate. HAMAP-Rule MF_00703

Sequence similarities

Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 516516Putative thymidine phosphorylase HAMAP-Rule MF_00703
PRO_0000314703

Sequences

Sequence LengthMass (Da)Tools
Q607P2 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: E5EFD62B1A7A1210

FASTA51656,438
        10         20         30         40         50         60 
MSDEESIKTR LKLRPVAIDT YRENVAYLHR ECSVYRAEGF QALAKIRVGC NGKQIEAVLN 

        70         80         90        100        110        120 
VVDDVCIVAP DELGLSEQAF QRFGEPAGQL VNVAQAEPPL SMDGVRRKIG GERLDYGDYQ 

       130        140        150        160        170        180 
AITSDIAKGR YSKMEMAAFL VATGQNGLDR DEVLSLTRAM LETGVRLSWN EPLVADKHCI 

       190        200        210        220        230        240 
GGIPGNRTSL LIVPIVAAHG MLIPKTSSRA ITSPAGTADT MEVLARTDLA PESLDRLVRM 

       250        260        270        280        290        300 
ERGCLAWGGT TRLAPVDDML ISVERPLGID SQGQMVASIL SKKLAAGATH LLLDIPVGPT 

       310        320        330        340        350        360 
AKVRQMRDAM SLRKLFEYVG DRVGLHLEAV ITDGAQPVGR GIGPVLEVRD VMQVLENDPE 

       370        380        390        400        410        420 
APVDLREKSL RLAGRILEFD PDVRGGFGYS IARDILESGR ALAKMHRIID AQGRQERRLE 

       430        440        450        460        470        480 
PGRLVFEVRA ERAGVVVGID NFFLAQTARL AGAPMSRGAG VDLLNKLGDT VEEGQPLYRV 

       490        500        510 
YAEFPANFEF AREFTRTRSG YNIGDAAFLT KTHMEF 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017282 Genomic DNA. Translation: AAU92022.1.
RefSeqYP_114156.1. NC_002977.6.

3D structure databases

ProteinModelPortalQ607P2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243233.MCA1717.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU92022; AAU92022; MCA1717.
GeneID3102436.
KEGGmca:MCA1717.
PATRIC22607276. VBIMetCap22254_1746.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0213.
HOGENOMHOG000252767.
KOK00758.
OMACHSEGFE.
OrthoDBEOG61ZTGG.
ProtClustDBPRK04350.

Family and domain databases

Gene3D3.40.1030.10. 1 hit.
3.90.1170.30. 1 hit.
HAMAPMF_00703. Thymid_phosp_2.
InterProIPR000312. Glycosyl_Trfase_fam3.
IPR017459. Glycosyl_Trfase_fam3_N_dom.
IPR013102. PYNP_C.
IPR000053. Pyrmidine_PPase.
IPR017872. Pyrmidine_PPase_CS.
IPR028579. Thym_Pase_Put.
IPR013466. Thymidine/AMP_Pase.
[Graphical view]
PANTHERPTHR10515. PTHR10515. 1 hit.
PfamPF02885. Glycos_trans_3N. 1 hit.
PF00591. Glycos_transf_3. 1 hit.
PF07831. PYNP_C. 1 hit.
[Graphical view]
PIRSFPIRSF000478. TP_PyNP. 1 hit.
SMARTSM00941. PYNP_C. 1 hit.
[Graphical view]
SUPFAMSSF47648. SSF47648. 1 hit.
SSF52418. SSF52418. 1 hit.
SSF54680. SSF54680. 1 hit.
TIGRFAMsTIGR02645. ARCH_P_rylase. 1 hit.
PROSITEPS00647. THYMID_PHOSPHORYLASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameTYPH_METCA
AccessionPrimary (citable) accession number: Q607P2
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: November 23, 2004
Last modified: February 19, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families