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Q60755

- CALCR_MOUSE

UniProt

Q60755 - CALCR_MOUSE

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Protein
Calcitonin receptor
Gene
Calcr
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at transcript leveli

Functioni

This is a receptor for calcitonin. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. The calcitonin receptor is thought to couple to the heterotrimeric guanosine triphosphate-binding protein that is sensitive to cholera toxin.

GO - Molecular functioni

  1. calcitonin receptor activity Source: MGI

GO - Biological processi

  1. adenylate cyclase-activating G-protein coupled receptor signaling pathway Source: MGI
  2. negative regulation of ossification Source: MGI
  3. osteoclast differentiation Source: MGI
  4. positive regulation of cytosolic calcium ion concentration Source: MGI
  5. regulation of mRNA stability Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptor, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Recommended name:
Calcitonin receptor
Short name:
CT-R
Gene namesi
Name:Calcr
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 6

Organism-specific databases

MGIiMGI:101950. Calcr.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini42 – 170129Extracellular Reviewed prediction
Add
BLAST
Transmembranei171 – 19020Helical; Name=1; Reviewed prediction
Add
BLAST
Topological domaini191 – 1977Cytoplasmic Reviewed prediction
Transmembranei198 – 21720Helical; Name=2; Reviewed prediction
Add
BLAST
Topological domaini218 – 27457Extracellular Reviewed prediction
Add
BLAST
Transmembranei275 – 29723Helical; Name=3; Reviewed prediction
Add
BLAST
Topological domaini298 – 31417Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei315 – 33420Helical; Name=4; Reviewed prediction
Add
BLAST
Topological domaini335 – 35016Extracellular Reviewed prediction
Add
BLAST
Transmembranei351 – 37424Helical; Name=5; Reviewed prediction
Add
BLAST
Topological domaini375 – 39723Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei398 – 41518Helical; Name=6; Reviewed prediction
Add
BLAST
Topological domaini416 – 42712Extracellular Reviewed prediction
Add
BLAST
Transmembranei428 – 44922Helical; Name=7; Reviewed prediction
Add
BLAST
Topological domaini450 – 53384Cytoplasmic Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. acrosomal vesicle Source: MGI
  2. cilium Source: MGI
  3. integral component of membrane Source: UniProtKB-KW
  4. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4141 Reviewed prediction
Add
BLAST
Chaini42 – 533492Calcitonin receptor
PRO_0000012807Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi45 – 451N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi72 ↔ 98 By similarity
Disulfide bondi89 ↔ 129 By similarity
Glycosylationi90 – 901N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi112 ↔ 151 By similarity
Glycosylationi142 – 1421N-linked (GlcNAc...) Reviewed prediction
Glycosylationi147 – 1471N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PRIDEiQ60755.

PTM databases

PhosphoSiteiQ60755.

Expressioni

Gene expression databases

CleanExiMM_CALCR.
GenevestigatoriQ60755.

Interactioni

Subunit structurei

Interacts with GPRASP2 By similarity.

Structurei

3D structure databases

ProteinModelPortaliQ60755.
SMRiQ60755. Positions 60-152, 162-453.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG255868.
GeneTreeiENSGT00750000117654.
HOVERGENiHBG102129.
InParanoidiQ60755.
KOiK04576.
OMAiTHEAESY.
PhylomeDBiQ60755.
TreeFamiTF315710.

Family and domain databases

InterProiIPR003287. GCPR_2_calcitonin_rcpt_fam.
IPR017981. GPCR_2-like.
IPR001688. GPCR_2_calcitonin_rcpt.
IPR001879. GPCR_2_extracellular_dom.
IPR000832. GPCR_2_secretin-like.
IPR017983. GPCR_2_secretin-like_CS.
[Graphical view]
PfamiPF00002. 7tm_2. 1 hit.
PF02793. HRM. 1 hit.
[Graphical view]
PRINTSiPR00361. CALCITONINR.
PR01350. CTRFAMILY.
PR00249. GPCRSECRETIN.
SMARTiSM00008. HormR. 1 hit.
[Graphical view]
PROSITEiPS00649. G_PROTEIN_RECEP_F2_1. 1 hit.
PS00650. G_PROTEIN_RECEP_F2_2. 1 hit.
PS50227. G_PROTEIN_RECEP_F2_3. 1 hit.
PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q60755-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MTPRRSRVKR RNLRKPKMRF LLVNRFTLLL LLLVSPTPVL QAPTNLTDSG    50
LDQEPFLYLV GRKKLLDAQY KCYDRIHQLP SYEGEGLYCN RTWDGWMCWD 100
DTPAGATAYQ HCPDYFPDFD TAEKVSKYCD ENGEWFRHPD SNRTWSNYTL 150
CNAFTSEKLQ NAYVLYYLAL VGHSLSIAAL VASMLIFWIF KNLSCQRVTL 200
HKHMFLTYIL NSIIIIIHLV EVVPNGDLVR RDPMHIFHHN THMWTMQWEL 250
SPPLPLSAHE GKMDPHASEV ISCKVLHFLH QYMMSCNYFW MLCEGIYLHT 300
LIVMAVFTDE QRLRWYYLLG WGFPIVPTII HAITRALYYN DNCWLSAETH 350
LLYIIHGPVM VALVVNFFFL LNIVRVLVTK MRQTHEAESY MYLKAVKATM 400
VLVPLLGIQF VVFPWRPSNK VLGKIYDYLM HSLIHFQGFF VATIYCFCNH 450
EVQVTLKRQW TQFKIQWSQR WGRRRRPTNR VVSAPRAVAF AEPDGLPIYI 500
CHQEPRNPPI SNNEGEESTE MIPMNVIQQD ASA 533
Length:533
Mass (Da):62,469
Last modified:October 16, 2013 - v2
Checksum:i2598AF1EC7AA570B
GO
Isoform 2 (identifier: Q60755-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     234-270: Missing.

Show »
Length:496
Mass (Da):58,126
Checksum:i33CC7381BC9C4A15
GO

Sequence cautioni

The sequence AAA69521.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei234 – 27037Missing in isoform 2.
VSP_053294Add
BLAST

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti257 – 2571S → C in AAA69521. 1 Publication
Sequence conflicti473 – 4731Missing in AAA69521. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U18542 mRNA. Translation: AAA69521.1. Different initiation.
AK039161 mRNA. Translation: BAC30261.1.
AK162391 mRNA. Translation: BAE36888.1.
AK133983 mRNA. Translation: BAE21967.1.
AK138275 mRNA. Translation: BAE23606.1.
AC066688 Genomic DNA. No translation available.
AC161368 Genomic DNA. No translation available.
CH466533 Genomic DNA. Translation: EDL13991.1.
CH466533 Genomic DNA. Translation: EDL13992.1.
BC119232 mRNA. Translation: AAI19233.1.
BC119272 mRNA. Translation: AAI19273.1.
CCDSiCCDS39416.1. [Q60755-2]
CCDS39417.1. [Q60755-1]
PIRiI49154.
RefSeqiNP_001036190.1. NM_001042725.1. [Q60755-2]
NP_031614.2. NM_007588.2. [Q60755-1]
XP_006505035.1. XM_006504972.1. [Q60755-1]
XP_006505036.1. XM_006504973.1. [Q60755-2]
UniGeneiMm.4642.

Genome annotation databases

EnsembliENSMUST00000075644; ENSMUSP00000075070; ENSMUSG00000023964. [Q60755-1]
ENSMUST00000115622; ENSMUSP00000111285; ENSMUSG00000023964. [Q60755-2]
ENSMUST00000168592; ENSMUSP00000130243; ENSMUSG00000023964. [Q60755-2]
ENSMUST00000170266; ENSMUSP00000132124; ENSMUSG00000023964. [Q60755-1]
ENSMUST00000171613; ENSMUSP00000130083; ENSMUSG00000023964. [Q60755-2]
GeneIDi12311.
KEGGimmu:12311.
UCSCiuc009ave.1. mouse.
uc009avf.1. mouse.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U18542 mRNA. Translation: AAA69521.1 . Different initiation.
AK039161 mRNA. Translation: BAC30261.1 .
AK162391 mRNA. Translation: BAE36888.1 .
AK133983 mRNA. Translation: BAE21967.1 .
AK138275 mRNA. Translation: BAE23606.1 .
AC066688 Genomic DNA. No translation available.
AC161368 Genomic DNA. No translation available.
CH466533 Genomic DNA. Translation: EDL13991.1 .
CH466533 Genomic DNA. Translation: EDL13992.1 .
BC119232 mRNA. Translation: AAI19233.1 .
BC119272 mRNA. Translation: AAI19273.1 .
CCDSi CCDS39416.1. [Q60755-2 ]
CCDS39417.1. [Q60755-1 ]
PIRi I49154.
RefSeqi NP_001036190.1. NM_001042725.1. [Q60755-2 ]
NP_031614.2. NM_007588.2. [Q60755-1 ]
XP_006505035.1. XM_006504972.1. [Q60755-1 ]
XP_006505036.1. XM_006504973.1. [Q60755-2 ]
UniGenei Mm.4642.

3D structure databases

ProteinModelPortali Q60755.
SMRi Q60755. Positions 60-152, 162-453.
ModBasei Search...
MobiDBi Search...

Chemistry

GuidetoPHARMACOLOGYi 43.

Protein family/group databases

GPCRDBi Search...

PTM databases

PhosphoSitei Q60755.

Proteomic databases

PRIDEi Q60755.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000075644 ; ENSMUSP00000075070 ; ENSMUSG00000023964 . [Q60755-1 ]
ENSMUST00000115622 ; ENSMUSP00000111285 ; ENSMUSG00000023964 . [Q60755-2 ]
ENSMUST00000168592 ; ENSMUSP00000130243 ; ENSMUSG00000023964 . [Q60755-2 ]
ENSMUST00000170266 ; ENSMUSP00000132124 ; ENSMUSG00000023964 . [Q60755-1 ]
ENSMUST00000171613 ; ENSMUSP00000130083 ; ENSMUSG00000023964 . [Q60755-2 ]
GeneIDi 12311.
KEGGi mmu:12311.
UCSCi uc009ave.1. mouse.
uc009avf.1. mouse.

Organism-specific databases

CTDi 799.
MGIi MGI:101950. Calcr.

Phylogenomic databases

eggNOGi NOG255868.
GeneTreei ENSGT00750000117654.
HOVERGENi HBG102129.
InParanoidi Q60755.
KOi K04576.
OMAi THEAESY.
PhylomeDBi Q60755.
TreeFami TF315710.

Miscellaneous databases

NextBioi 280862.
PROi Q60755.
SOURCEi Search...

Gene expression databases

CleanExi MM_CALCR.
Genevestigatori Q60755.

Family and domain databases

InterProi IPR003287. GCPR_2_calcitonin_rcpt_fam.
IPR017981. GPCR_2-like.
IPR001688. GPCR_2_calcitonin_rcpt.
IPR001879. GPCR_2_extracellular_dom.
IPR000832. GPCR_2_secretin-like.
IPR017983. GPCR_2_secretin-like_CS.
[Graphical view ]
Pfami PF00002. 7tm_2. 1 hit.
PF02793. HRM. 1 hit.
[Graphical view ]
PRINTSi PR00361. CALCITONINR.
PR01350. CTRFAMILY.
PR00249. GPCRSECRETIN.
SMARTi SM00008. HormR. 1 hit.
[Graphical view ]
PROSITEi PS00649. G_PROTEIN_RECEP_F2_1. 1 hit.
PS00650. G_PROTEIN_RECEP_F2_2. 1 hit.
PS50227. G_PROTEIN_RECEP_F2_3. 1 hit.
PS50261. G_PROTEIN_RECEP_F2_4. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and characterization of a mouse brain calcitonin receptor complementary deoxyribonucleic acid and mapping of the calcitonin receptor gene."
    Yamin M., Gorn A.H., Flannery M.R., Jenkins N.A., Gilbert D.J., Copeland N.G., Tapp D.R., Krane S.M., Goldring S.R.
    Endocrinology 135:2635-2643(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
    Strain: BALB/c.
    Tissue: Brain.
  2. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
    Strain: C57BL/6J.
    Tissue: Diencephalon and Hypothalamus.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  4. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  5. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Tissue: Brain.

Entry informationi

Entry nameiCALCR_MOUSE
AccessioniPrimary (citable) accession number: Q60755
Secondary accession number(s): F6X7J4, Q3UUL9, Q8CAB0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: October 16, 2013
Last modified: September 3, 2014
This is version 108 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. 7-transmembrane G-linked receptors
    List of 7-transmembrane G-linked receptor entries
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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