Q60381 (Y059_METJA) Reviewed, UniProtKB/Swiss-Prot
Last modified
November 16, 2011.
Version 65.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Uncharacterized nitrogen regulatory PII-like protein MJ0059 | ||
| Gene names |
| ||
| Organism | Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) | ||
| Taxonomic identifier | 243232 [NCBI] | ||
| Taxonomic lineage | Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus |
Protein attributes
| Sequence length | 112 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Sequence similarities | Belongs to the P(II) protein family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transcription Transcription regulation |
| Ligand | Nucleotide-binding |
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | regulation of nitrogen utilization Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependentInferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependentInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | enzyme regulator activity Inferred from electronic annotation. Source: InterPro nucleotide bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 112 | 112 | Uncharacterized nitrogen regulatory PII-like protein MJ0059 | PRO_0000139815 | ||||||||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||||||||
| Modified residue | 51 | 1 | O-UMP-tyrosine By similarity | |||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||||
| Beta strand | 1 – 8 | 8 | ||||||||||||||||||||||||||
| Helix | 10 – 12 | 3 | ||||||||||||||||||||||||||
| Helix | 13 – 22 | 10 | ||||||||||||||||||||||||||
| Beta strand | 28 – 36 | 9 | ||||||||||||||||||||||||||
| Beta strand | 39 – 42 | 4 | ||||||||||||||||||||||||||
| Beta strand | 52 – 54 | 3 | ||||||||||||||||||||||||||
| Beta strand | 56 – 66 | 11 | ||||||||||||||||||||||||||
| Helix | 67 – 69 | 3 | ||||||||||||||||||||||||||
| Helix | 70 – 81 | 12 | ||||||||||||||||||||||||||
| Beta strand | 89 – 96 | 8 | ||||||||||||||||||||||||||
| Beta strand | 98 – 101 | 4 | ||||||||||||||||||||||||||
| Turn | 102 – 104 | 3 | ||||||||||||||||||||||||||
Sequences
References
| [1] | "Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G. Venter J.C.Science 273:1058-1073(1996) [PubMed: 8688087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | L77117 Genomic DNA. Translation: AAB98041.1. | ||||||||||||||||||||||||
| PIR | C64307. | ||||||||||||||||||||||||
| RefSeq | NP_247023.1. NC_000909.1. | ||||||||||||||||||||||||
3D structure databases | |||||||||||||||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||||||||
| ProteinModelPortal | Q60381. | ||||||||||||||||||||||||
| SMR | Q60381. Positions 1-112. | ||||||||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||||||||
| MINT | MINT-4297928. | ||||||||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||||||||
Genome annotation databases | |||||||||||||||||||||||||
| GeneID | 1450898. | ||||||||||||||||||||||||
| GenomeReviews | Gene locus MJ0059 in contig L77117_GR. | ||||||||||||||||||||||||
| KEGG | mja:MJ_0059. | ||||||||||||||||||||||||
| NMPDR | fig|243232.1.peg.60. | ||||||||||||||||||||||||
| TIGR | MJ0059. | ||||||||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||||||||
| HOGENOM | HBG748089. | ||||||||||||||||||||||||
| OMA | GMTISQV. | ||||||||||||||||||||||||
| ProtClustDB | CLSK2460145. | ||||||||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||||||||
| BioCyc | MJAN243232:MJ_0059-MONOMER. | ||||||||||||||||||||||||
Family and domain databases | |||||||||||||||||||||||||
| InterPro | IPR002187. N-reg_PII. IPR011322. N-reg_PII-like_a/b. IPR015867. N-reg_PII/ATP_PRibTrfase_C. IPR017918. N-reg_PII_CS. [Graphical view] | ||||||||||||||||||||||||
| Gene3D | G3DSA:3.30.70.120. PII_glnB. 1 hit. | ||||||||||||||||||||||||
| KO | K04751. | ||||||||||||||||||||||||
| Pfam | PF00543. P-II. 1 hit. [Graphical view] | ||||||||||||||||||||||||
| PRINTS | PR00340. PIIGLNB. | ||||||||||||||||||||||||
| SMART | SM00938. P-II. 1 hit. [Graphical view] | ||||||||||||||||||||||||
| SUPFAM | SSF54913. N-reg_PII-like_a/b. 1 hit. | ||||||||||||||||||||||||
| PROSITE | PS00638. PII_GLNB_CTER. 1 hit. PS51343. PII_GLNB_DOM. 1 hit. [Graphical view] | ||||||||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||||||||
Entry information
| Entry name | Y059_METJA | ||||||||
| Accession | Primary (citable) accession number: Q60381 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| Methanococcus jannaschii Methanococcus jannaschii: entries and gene names |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with