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Protein

Uncharacterized nitrogen regulatory PII-like protein MJ0059

Gene

MJ0059

Organism
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized nitrogen regulatory PII-like protein MJ0059
Gene namesi
Ordered Locus Names:MJ0059
OrganismiMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Taxonomic identifieri243232 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
Proteomesi
  • UP000000805 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 112112Uncharacterized nitrogen regulatory PII-like protein MJ0059PRO_0000139815Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei51 – 511O-UMP-tyrosinePROSITE-ProRule annotation

Keywords - PTMi

Phosphoprotein

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
MJ1343Q587392EBI-7201321,EBI-7201308

Protein-protein interaction databases

IntActiQ60381. 1 interaction.
MINTiMINT-4297928.
STRINGi243232.MJ_0059.

Structurei

Secondary structure

112
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi1 – 88Combined sources
Helixi10 – 123Combined sources
Helixi13 – 2210Combined sources
Beta strandi28 – 369Combined sources
Beta strandi39 – 424Combined sources
Beta strandi52 – 543Combined sources
Beta strandi56 – 6611Combined sources
Helixi67 – 693Combined sources
Helixi70 – 8112Combined sources
Beta strandi89 – 968Combined sources
Beta strandi98 – 1014Combined sources
Turni102 – 1043Combined sources
Helixi109 – 1124Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2J9CX-ray1.30A/B/C1-112[»]
2J9DX-ray2.10A/B/C/D/E/F/G/H/I/J/K/L1-112[»]
2J9EX-ray1.62A/B/C1-112[»]
ProteinModelPortaliQ60381.
SMRiQ60381. Positions 1-112.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ60381.

Family & Domainsi

Sequence similaritiesi

Belongs to the P(II) protein family.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiarCOG02305. Archaea.
COG0347. LUCA.
InParanoidiQ60381.
KOiK04751.
OMAiAIEVKGF.
PhylomeDBiQ60381.

Family and domain databases

Gene3Di3.30.70.120. 1 hit.
InterProiIPR002187. N-reg_PII.
IPR011322. N-reg_PII-like_a/b.
IPR015867. N-reg_PII/ATP_PRibTrfase_C.
IPR017918. N-reg_PII_CS.
[Graphical view]
PfamiPF00543. P-II. 1 hit.
[Graphical view]
PIRSFiPIRSF039144. GlnB. 1 hit.
PRINTSiPR00340. PIIGLNB.
SMARTiSM00938. P-II. 1 hit.
[Graphical view]
SUPFAMiSSF54913. SSF54913. 1 hit.
PROSITEiPS00638. PII_GLNB_CTER. 1 hit.
PS51343. PII_GLNB_DOM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q60381-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKVEAIIRP EKLEIVKKAL SDAGYVGMTV SEVKGRGVQG GIVERYRGRE
60 70 80 90 100
YIVDLIPKVK IELVVKEEDV DNVIDIICEN ARTGNPGDGK IFVIPVERVV
110
RVRTKEEGKE AL
Length:112
Mass (Da):12,490
Last modified:November 1, 1997 - v1
Checksum:i3DC3F307C32FE9F3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA. Translation: AAB98041.1.
PIRiC64307.

Genome annotation databases

EnsemblBacteriaiAAB98041; AAB98041; MJ_0059.
KEGGimja:MJ_0059.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA. Translation: AAB98041.1.
PIRiC64307.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2J9CX-ray1.30A/B/C1-112[»]
2J9DX-ray2.10A/B/C/D/E/F/G/H/I/J/K/L1-112[»]
2J9EX-ray1.62A/B/C1-112[»]
ProteinModelPortaliQ60381.
SMRiQ60381. Positions 1-112.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ60381. 1 interaction.
MINTiMINT-4297928.
STRINGi243232.MJ_0059.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB98041; AAB98041; MJ_0059.
KEGGimja:MJ_0059.

Phylogenomic databases

eggNOGiarCOG02305. Archaea.
COG0347. LUCA.
InParanoidiQ60381.
KOiK04751.
OMAiAIEVKGF.
PhylomeDBiQ60381.

Miscellaneous databases

EvolutionaryTraceiQ60381.

Family and domain databases

Gene3Di3.30.70.120. 1 hit.
InterProiIPR002187. N-reg_PII.
IPR011322. N-reg_PII-like_a/b.
IPR015867. N-reg_PII/ATP_PRibTrfase_C.
IPR017918. N-reg_PII_CS.
[Graphical view]
PfamiPF00543. P-II. 1 hit.
[Graphical view]
PIRSFiPIRSF039144. GlnB. 1 hit.
PRINTSiPR00340. PIIGLNB.
SMARTiSM00938. P-II. 1 hit.
[Graphical view]
SUPFAMiSSF54913. SSF54913. 1 hit.
PROSITEiPS00638. PII_GLNB_CTER. 1 hit.
PS51343. PII_GLNB_DOM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

Entry informationi

Entry nameiY059_METJA
AccessioniPrimary (citable) accession number: Q60381
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 11, 2015
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Methanococcus jannaschii
    Methanococcus jannaschii: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.