Q60368 (FER1_METJA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized ferredoxin MJ0061

Gene names

Ordered Locus Names:

MJ0061

Organism

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)

Taxonomic identifier

243232 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus

Protein attributes

Sequence length	80 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Binds 2 4Fe-4S clusters By similarity.
Sequence similarities	Contains 2 4Fe-4S ferredoxin-type domains.

Ontologies

Keywords
Biological process	Electron transport Transport
Domain	Repeat
Ligand	4Fe-4S Iron Iron-sulfur Metal-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	electron transport chain Inferred from electronic annotation. Source: UniProtKB-KW transport Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: UniProtKB-KW electron carrier activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 80	80	Uncharacterized ferredoxin MJ0061		PRO_0000159129
Regions
	Domain	21 – 49	29	4Fe-4S ferredoxin-type 1
	Domain	50 – 80	31	4Fe-4S ferredoxin-type 2
Sites
	Metal binding	30	1	Iron-sulfur 1 (4Fe-4S) By similarity
	Metal binding	33	1	Iron-sulfur 1 (4Fe-4S) By similarity
	Metal binding	36	1	Iron-sulfur 1 (4Fe-4S) By similarity
	Metal binding	40	1	Iron-sulfur 1 (4Fe-4S) By similarity
	Metal binding	60	1	Iron-sulfur 2 (4Fe-4S) By similarity
	Metal binding	63	1	Iron-sulfur 2 (4Fe-4S) By similarity
	Metal binding	66	1	Iron-sulfur 2 (4Fe-4S) By similarity
	Metal binding	70	1	Iron-sulfur 2 (4Fe-4S) By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q60368 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: BE7C286649604918	FASTA	80	9,185
	10 20 30 40 50 60 MLSKILGIFK GKEKIEEKSN KIIEIDYNKC KNCLSCYRVC KNNVFAIKNN RVVVKNENNC 70 80 TKCGECLKVC RYGAIILYDA

References

[1]

"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G. , Merrick J.M., Glodek A., Scott J.L., Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R., Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D., Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Science 273:1058-1073(1996) [PubMed: 8688087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

Cross-references

Sequence databases
EMBL GenBank DDBJ	L77117 Genomic DNA. Translation: AAB98043.1.
PIR	E64307.
RefSeq	NP_247025.1. NC_000909.1.
3D structure databases
ProteinModelPortal	Q60368.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1450900.
GenomeReviews	Gene locus MJ0061 in contig L77117_GR.
KEGG	mja:MJ_0061.
NMPDR	fig|243232.1.peg.62.
TIGR	MJ0061.
Phylogenomic databases
OMA	CKNNVFA.
ProtClustDB	CLSK2749833.
Enzyme and pathway databases
BioCyc	MJAN243232:MJ_0061-MONOMER.
Family and domain databases
InterPro	IPR001450. 4Fe4S-bd_dom. IPR017896. 4Fe4S_Fe-S-bd. [Graphical view]
Pfam	PF00037. Fer4. 2 hits. [Graphical view]
PROSITE	PS00198. 4FE4S_FER_1. False negative. PS51379. 4FE4S_FER_2. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

FER1_METJA

Accession

Primary (citable) accession number: Q60368

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	October 19, 2011
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program