Q60366 (Y058_METJA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative ammonium transporter MJ0058

Gene names

Ordered Locus Names:

MJ0058

Organism

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)

Taxonomic identifier

243232 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus

Protein attributes

Sequence length	391 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein Probable.
Sequence similarities	Belongs to the ammonia transporter channel (TC 1.A.11.2) family. [View classification]

Ontologies

Keywords
Biological process	Ammonia transport Transport
Cellular component	Cell membrane Membrane
Domain	Transmembrane Transmembrane helix
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ammonium transmembrane transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 391	391	Putative ammonium transporter MJ0058		PRO_0000139764
Regions
	Transmembrane	12 – 32	21	Helical; Potential
	Transmembrane	51 – 71	21	Helical; Potential
	Transmembrane	88 – 108	21	Helical; Potential
	Transmembrane	112 – 132	21	Helical; Potential
	Transmembrane	152 – 172	21	Helical; Potential
	Transmembrane	192 – 212	21	Helical; Potential
	Transmembrane	223 – 243	21	Helical; Potential
	Transmembrane	261 – 281	21	Helical; Potential
	Transmembrane	305 – 325	21	Helical; Potential
	Transmembrane	338 – 358	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	Q60366 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: 33632A73849E1C9A	FASTA	391	41,153
	10 20 30 40 50 60 MFEVKHMDGI DVFFFMWAAS LIFFMKAGFI ALEIGQFRAK NVSYHCVLKL LDLAAVFIAY 70 80 90 100 110 120 LFIGYGISYG FENIMPLITG TFDADLGAWW MKMVMFAAAA VTIITGGVAE RIKILPYFIG 130 140 150 160 170 180 ALIVGGILYP IVEHLVWGGG FANLGINFHD YAGSGAVHLF GGLVGLMAAY VLGPRIDKYI 190 200 210 220 230 240 NGKPQAIPGH NIPIAVLGAF ILAFGWYGFN IGSASGIANG VELASVAMAT TMALAGGIIG 250 260 270 280 290 300 GALSSRNDPL YTANGMCAGL VAVCSGVDLF TPIGAFIVGL LAGIQQPFTY KFIEEKLKID 310 320 330 340 350 360 DVCAIGPVHA MSGLIGVICA GIPFLLKADA VSKVSITGQI IGAIVIALIA IVGGLIIYKG 370 380 390 LDLTIGLRVS EEAEKVGLDT AILQTTAYSE E

References

[1]

"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G. , Merrick J.M., Glodek A., Scott J.L., Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R., Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D., Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Science 273:1058-1073(1996) [PubMed: 8688087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

Cross-references

Sequence databases
EMBL GenBank DDBJ	L77117 Genomic DNA. Translation: AAB98038.1.
PIR	B64307.
RefSeq	NP_247022.1. NC_000909.1.
3D structure databases
ProteinModelPortal	Q60366.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1450897.
GenomeReviews	Gene locus MJ0058 in contig L77117_GR.
KEGG	mja:MJ_0058.
NMPDR	fig|243232.1.peg.59.
TIGR	MJ0058.
Phylogenomic databases
HOGENOM	HBG677626.
OMA	CAGIPFL.
ProtClustDB	CLSK796258.
Enzyme and pathway databases
BioCyc	MJAN243232:MJ_0058-MONOMER.
Family and domain databases
InterPro	IPR001905. Ammonium_transpt. IPR018047. Ammonium_transpt_CS. IPR024041. NH4_transpt_AmtB-like. [Graphical view]
Gene3D	G3DSA:1.10.3430.10. G3DSA:1.10.3430.10. 1 hit.
PANTHER	PTHR11730. Ammonium_transpt. 1 hit.
Pfam	PF00909. Ammonium_transp. 1 hit. [Graphical view]
SUPFAM	SSF111352. RH_like_transpt. 1 hit.
TIGRFAMs	TIGR00836. Amt. 1 hit.
PROSITE	PS01219. AMMONIUM_TRANSP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y058_METJA

Accession

Primary (citable) accession number: Q60366

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	October 19, 2011
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program