Reviewed, UniProtKB/Swiss-Prot Q60339 (FRHD_METJA)

Names and origin

Protein names

Recommended name:
    Coenzyme F420 hydrogenase subunit delta
Alternative name(s):
    Putative coenzyme F420 hydrogenase-processing subunit

Gene names

Name:	frhD
Ordered Locus Names:	MJ0030

Organism

Methanocaldococcus jannaschii (Methanococcus jannaschii) [Complete proteome] [HAMAP]

Taxonomic identifier

2190 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus

Protein attributes

Sequence length	183 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the peptidase A31 family.

Ontologies

Keywords
Molecular function	Aspartyl protease Hydrolase Protease
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein modification process Inferred from electronic annotation. Source: InterPro
Molecular function	aspartic-type endopeptidase activity Inferred from electronic annotation. Source: UniProtKB-KW enzyme activator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 183	183	Coenzyme F420 hydrogenase subunit delta		PRO_0000201946

Sequences

	Sequence		Length	Mass (Da)
	Q60339-1 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: DD79B2FB9DEFE5A7	FASTA	183	20,628
	10 20 30 40 50 60 MNETMKAEIE SQDDELFDLT PSYLKKEIMV LACGNILFAD DGFSVHVIEK LNKILTDKEK 70 80 90 100 110 120 QKIALVDAGA GAPQQVLTLI DENSKTKKII VVDVIDWGIK PGEIKIIEKD ELPNPKYHRL 130 140 150 160 170 180 DSHDWPLAPL LREVAEKYNI EVKVVGCQAK YISEPDVYIG LSEEVEKAVD KAVEIILREL RGD

References

[1]

"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G. , Merrick J.M., Glodek A., Scott J.L., Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R., Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D., Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Science 273:1058-1073(1996) [PubMed: 8688087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

Cross-references

Sequence databases
EMBLGenBankDDBJ	L77117 Genomic DNA. Translation: AAB98009.1.
PIR	F64303.
RefSeq	NP_246993.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1450868.
GenomeReviews	Gene locus MJ0030 in contig L77117_GR.
KEGG	mja:MJ0030.
NMPDR	fig|243232.1.peg.30.
TIGR	MJ0030.
Phylogenomic databases
HOGENOM	Q60339.
OMA	ACGNILF
Family and domain databases
InterPro	IPR004411. Pept_A31_F420-red_hyd_d. IPR000671. Peptidase_A31. [Graphical view]
Gene3D	G3DSA:3.40.50.1450. Peptidase_A31. 1 hit.
Pfam	PF01750. HycI. 1 hit. [Graphical view]
PRINTS	PR00446. HYDRGNUPTAKE.
TIGRFAMs	TIGR00130. frhD. 1 hit. TIGR00072. hydrog_prot. 1 hit.
ProtoNet	Search...

Entry information

Entry name

FRHD_METJA

Accession

Primary (citable) accession number: Q60339

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	November 24, 2009
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)