Q60329 (Y014_METJA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein MJ0014

Gene names

Ordered Locus Names:

MJ0014

Organism

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)

Taxonomic identifier

243232 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus

Protein attributes

Sequence length	213 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro recombinase activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 213

213

Uncharacterized protein MJ0014

PRO_0000106654

Secondary structure

1

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213

Helix Strand Turn

Details...

Beta strand

63 – 65

3

Helix

73 – 75

3

Helix

76 – 92

17

Helix

112 – 122

11

Beta strand

126 – 133

8

Helix

134 – 137

4

Helix

143 – 151

9

Beta strand

155 – 159

5

Helix

167 – 181

15

Helix

191 – 204

14

Sequences

	Sequence		Length	Mass (Da)
	Q60329 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: 7786C8202AA34898	FASTA	213	25,041
	10 20 30 40 50 60 MMIMERHYTL KEASKILGVS IKTLQRWDKA GKIKCIRTLG GKRRVPESEI KRILGIKDKE 70 80 90 100 110 120 QRKIIGYARV SFNAQKDDLE RQIQLIKSYA EENGWDIQIL KDIGSGLNEK RKNYKKLLKM 130 140 150 160 170 180 VMNRKVEKVI IAYPDRLTRF GFETLKEFFK SYGTEIVIIN KKHKTPQEEL VEDLITIVSH 190 200 210 FAGKLYGMHS HKYKKLTKTV KEIVREEDAK EKE

References

[1]

"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G. , Merrick J.M., Glodek A., Scott J.L., Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R., Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D., Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Science 273:1058-1073(1996) [PubMed: 8688087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

L77117 Genomic DNA. Translation: AAB97992.1.

PIR

F64301.

RefSeq

NP_246977.1. NC_000909.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3LHK	X-ray	2.20	A/B/C/D	63-213	[»]

ProteinModelPortal

Q60329.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

1450852.

GenomeReviews

Gene locus MJ0014 in contig L77117_GR.

KEGG

mja:MJ_0014.

NMPDR

fig|243232.1.peg.14.

TIGR

MJ0014.

Phylogenomic databases

HOGENOM

HBG442468.

OMA

KRRVPES.

ProtClustDB

CLSK254474.

Enzyme and pathway databases

BioCyc

MJAN243232:MJ_0014-MONOMER.

Family and domain databases

InterPro

IPR009061. DNA-bd_dom_put.
IPR006119. Resolv_N.
IPR000551. Tscrpt_reg_HTH_MerR.
IPR010093. Xis_DNA-bd.
[Graphical view]

Gene3D

G3DSA:3.40.50.1390. Resolv_N. 1 hit.

KO

K07450.

Pfam

PF00376. MerR. 1 hit.
PF00239. Resolvase. 1 hit.
[Graphical view]

SMART

SM00857. Resolvase. 1 hit.
[Graphical view]

SUPFAM

SSF46955. Putativ_DNA_bind. 1 hit.
SSF53041. Resolv_N. 1 hit.

TIGRFAMs

TIGR01764. Excise. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Y014_METJA

Accession

Primary (citable) accession number: Q60329

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	November 16, 2011
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program