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Protein
Submitted name:

HrcU

Gene

hrpY

Organism
Pseudomonas syringae pv. syringae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. protein secretion Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
HrcUImported
Submitted name:
HrpYImported
Gene namesi
Name:hrpYImported
Synonyms:hrcUImported
OrganismiPseudomonas syringae pv. syringaeImported
Taxonomic identifieri321 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonasPseudomonas syringae

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliQ60239.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di3.40.1690.10. 1 hit.
InterProiIPR006307. BsaZ.
IPR006135. T3SS_substrate_exporter.
IPR029025. T3SS_substrate_exporter_C.
[Graphical view]
PANTHERiPTHR30531. PTHR30531. 1 hit.
PfamiPF01312. Bac_export_2. 1 hit.
[Graphical view]
PRINTSiPR00950. TYPE3IMSPROT.
SUPFAMiSSF160544. SSF160544. 1 hit.
TIGRFAMsiTIGR01404. FlhB_rel_III. 1 hit.

Sequencei

Sequence statusi: Complete.

Q60239-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSEKTEKATP KQLRDAREKG QVGQSQDLGK LLVLMAVSEI TLALADESVN
60 70 80 90 100
RLEALLSLSF QGIDRSFAAS VELIASEGFS VLLSFTLCSV GIAMLMRLIS
110 120 130 140 150
SWMQIGFLFA PKALKIDPNK INPFSHAKQM FSGQNLLNLL LSVLKAIAIG
160 170 180 190 200
ATLYVQVKPV LGTLAVLANS DLTTYWHALV ELFRHILRVI LGLLLAIAMI
210 220 230 240 250
DFAMQKYFHA KKLRMSHEDI KKEYKQSEGD PHVKGHRRQL AQEILNQEPS
260 270 280 290 300
AAPKPLEDAD MLLVNPTHYA VALYYRPGET PLPLIHCKGE DEEALALIAR
310 320 330 340 350
AKKAGIPVVQ SIWLTRTLYR SKVGKYIPRP TLQAVGHIYK VVRQLDEVTD

EVIQVEVEL
Length:359
Mass (Da):39,984
Last modified:November 1, 1996 - v1
Checksum:iBE74A4D3C0A8075E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U25812 Genomic DNA. Translation: AAB05078.1.
EF514224 Genomic DNA. Translation: ABQ88362.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U25812 Genomic DNA. Translation: AAB05078.1.
EF514224 Genomic DNA. Translation: ABQ88362.1.

3D structure databases

ProteinModelPortaliQ60239.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.40.1690.10. 1 hit.
InterProiIPR006307. BsaZ.
IPR006135. T3SS_substrate_exporter.
IPR029025. T3SS_substrate_exporter_C.
[Graphical view]
PANTHERiPTHR30531. PTHR30531. 1 hit.
PfamiPF01312. Bac_export_2. 1 hit.
[Graphical view]
PRINTSiPR00950. TYPE3IMSPROT.
SUPFAMiSSF160544. SSF160544. 1 hit.
TIGRFAMsiTIGR01404. FlhB_rel_III. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete hrp gene cluster of Pseudomonas syringae pv. syringae 61 includes two blocks of genes required for harpinPss secretion that are arranged colinearly with Yersinia ysc homologs."
    Huang H.-C., Lin R.-H., Chang C.-J., Collmer A., Deng W.-L.
    Mol. Plant Microbe Interact. 8:733-746(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 61Imported.
  2. Huang H.-C.
    Submitted (APR-1995) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 61Imported.
  3. "The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in plants."
    Alfano J.R., Charkowski A.O., Deng W.L., Badel J.L., Petnicki-Ocwieja T., van Dijk K., Collmer A.
    Proc. Natl. Acad. Sci. U.S.A. 97:4856-4861(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 61Imported.
  4. Alfano J.R., Collmer A.
    Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 61Imported.
  5. "Identification of Pseudomonas syringae pv. syringae 61 type III secretion system Hrp proteins that can travel the type III pathway and contribute to the translocation of effector proteins into plant cells."
    Ramos A.R., Morello J.E., Ravindran S., Deng W.L., Huang H.C., Collmer A.
    J. Bacteriol. 189:5773-5778(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 61Imported.
  6. "The sequence analysis of conserved effector locus of the Pseudomonas syringae pv. syringae 61."
    Yu C.-C., Huang H.-C.
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 61Imported.

Entry informationi

Entry nameiQ60239_PSESY
AccessioniPrimary (citable) accession number: Q60239
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: January 7, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.