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Q60239 (Q60239_PSESY) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length359 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Biological_processprotein secretion

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q60239 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: BE74A4D3C0A8075E

FASTA35939,984
        10         20         30         40         50         60 
MSEKTEKATP KQLRDAREKG QVGQSQDLGK LLVLMAVSEI TLALADESVN RLEALLSLSF 

        70         80         90        100        110        120 
QGIDRSFAAS VELIASEGFS VLLSFTLCSV GIAMLMRLIS SWMQIGFLFA PKALKIDPNK 

       130        140        150        160        170        180 
INPFSHAKQM FSGQNLLNLL LSVLKAIAIG ATLYVQVKPV LGTLAVLANS DLTTYWHALV 

       190        200        210        220        230        240 
ELFRHILRVI LGLLLAIAMI DFAMQKYFHA KKLRMSHEDI KKEYKQSEGD PHVKGHRRQL 

       250        260        270        280        290        300 
AQEILNQEPS AAPKPLEDAD MLLVNPTHYA VALYYRPGET PLPLIHCKGE DEEALALIAR 

       310        320        330        340        350 
AKKAGIPVVQ SIWLTRTLYR SKVGKYIPRP TLQAVGHIYK VVRQLDEVTD EVIQVEVEL 

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References

[1]"The complete hrp gene cluster of Pseudomonas syringae pv. syringae 61 includes two blocks of genes required for harpinPss secretion that are arranged colinearly with Yersinia ysc homologs."
Huang H.-C., Lin R.-H., Chang C.-J., Collmer A., Deng W.-L.
Mol. Plant Microbe Interact. 8:733-746(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 61 EMBL AAB05078.1.
[2]Huang H.-C.
Submitted (APR-1995) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 61 EMBL AAB05078.1.
[3]"The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in plants."
Alfano J.R., Charkowski A.O., Deng W.L., Badel J.L., Petnicki-Ocwieja T., van Dijk K., Collmer A.
Proc. Natl. Acad. Sci. U.S.A. 97:4856-4861(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 61 EMBL ABQ88362.1.
[4]Alfano J.R., Collmer A.
Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 61 EMBL ABQ88362.1.
[5]"Identification of Pseudomonas syringae pv. syringae 61 type III secretion system Hrp proteins that can travel the type III pathway and contribute to the translocation of effector proteins into plant cells."
Ramos A.R., Morello J.E., Ravindran S., Deng W.L., Huang H.C., Collmer A.
J. Bacteriol. 189:5773-5778(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 61 EMBL ABQ88362.1.
[6]"The sequence analysis of conserved effector locus of the Pseudomonas syringae pv. syringae 61."
Yu C.-C., Huang H.-C.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 61 EMBL ABQ88362.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U25812 Genomic DNA. Translation: AAB05078.1.
EF514224 Genomic DNA. Translation: ABQ88362.1.

3D structure databases

ProteinModelPortalQ60239.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR006307. T3SS_EscU.
IPR006135. T3SS_substrate_exporter.
[Graphical view]
PfamPF01312. Bac_export_2. 1 hit.
[Graphical view]
PRINTSPR00950. TYPE3IMSPROT.
TIGRFAMsTIGR01404. FlhB_rel_III. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ60239_PSESY
AccessionPrimary (citable) accession number: Q60239
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: February 19, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)