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Protein
Submitted name:

Mer operon regulator

Gene

merR

Organism
Pseudomonas fluorescens
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
Mer operon regulatorImported
Submitted name:
MerR family transcriptional regulatorImported
Submitted name:
Mercuric resistance operon regulatory proteinImported
Submitted name:
Mercury resistance DNA-binding proteinImported
Gene namesi
Name:merRImported
Synonyms:merR_2Imported
ORF Names:HZ99_21635Imported, PFLmoz3_00023Imported
Encoded oniPlasmid pMER05Imported
OrganismiPseudomonas fluorescensImported
Taxonomic identifieri294 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000028180 Componenti: Chromosome
  • UP000061348 Componenti: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliQ60233.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 76HTH merR-type DNA-bindingInterPro annotationAdd BLAST70

Sequence similaritiesi

Contains 1 HTH merR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

KOiK08365.

Family and domain databases

CDDicd04783. HTH_MerR1. 1 hit.
InterProiIPR009061. DNA-bd_dom_put.
IPR011794. MerR.
IPR000551. MerR-type_HTH_dom.
IPR015358. Tscrpt_reg_MerR_DNA-bd.
[Graphical view]
PfamiPF00376. MerR. 1 hit.
PF09278. MerR-DNA-bind. 1 hit.
[Graphical view]
PRINTSiPR00040. HTHMERR.
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
TIGRFAMsiTIGR02051. MerR. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q60233-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENNLENLTI GVFARTAGVN VETIRFYQRK GLLPEPDKPY GSIRRYGETD
60 70 80 90 100
VTRVRFVKSA QRLGFSLDEI AELLRLEDGT HCEEASSLAE HKLKDVRERM
110 120 130 140
ADLARMEAVL SDLVCACHAR KGNVSCPLIA SLQGKKEPRS ADAV
Length:144
Mass (Da):16,060
Last modified:November 1, 1996 - v1
Checksum:iE4B3EFEECA317F2D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L20694 Genomic DNA. Translation: AAB02644.1.
CP008896 Genomic DNA. Translation: AIG04657.1.
X73112 Genomic DNA. Translation: CAA51538.1.
LCYA01000001 Genomic DNA. Translation: KWV90334.1.
PIRiI39574.
S37044.
S51756.
RefSeqiWP_000429838.1. NZ_LCZD01000016.1.

Genome annotation databases

EnsemblBacteriaiAIG04657; AIG04657; HZ99_21635.
KEGGipfn:HZ99_21635.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L20694 Genomic DNA. Translation: AAB02644.1.
CP008896 Genomic DNA. Translation: AIG04657.1.
X73112 Genomic DNA. Translation: CAA51538.1.
LCYA01000001 Genomic DNA. Translation: KWV90334.1.
PIRiI39574.
S37044.
S51756.
RefSeqiWP_000429838.1. NZ_LCZD01000016.1.

3D structure databases

ProteinModelPortaliQ60233.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIG04657; AIG04657; HZ99_21635.
KEGGipfn:HZ99_21635.

Phylogenomic databases

KOiK08365.

Family and domain databases

CDDicd04783. HTH_MerR1. 1 hit.
InterProiIPR009061. DNA-bd_dom_put.
IPR011794. MerR.
IPR000551. MerR-type_HTH_dom.
IPR015358. Tscrpt_reg_MerR_DNA-bd.
[Graphical view]
PfamiPF00376. MerR. 1 hit.
PF09278. MerR-DNA-bind. 1 hit.
[Graphical view]
PRINTSiPR00040. HTHMERR.
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
TIGRFAMsiTIGR02051. MerR. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ60233_PSEFL
AccessioniPrimary (citable) accession number: Q60233
Secondary accession number(s): P75015
, Q44314, Q51768, Q51808, Q52601, Q56390, Q56443
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 2, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.