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Protein

Alpha-amylase

Gene
N/A
Organism
Xanthomonas campestris
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
OrganismiXanthomonas campestrisImported
Taxonomic identifieri339 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3030Sequence analysisAdd
BLAST
Chaini31 – 526496Alpha-amylaseSequence analysisPRO_5004265498Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ60102.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini48 – 441394AamyInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR006046. Alpha_amylase.
IPR022567. DUF3459.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 2 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
PF11941. DUF3459. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q60102-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSCRFRPL SFLLAAALGA SAAFAPSVHA ADAAPATPRS EGSGVWYEIF
60 70 80 90 100
VRAWYDTDGD GIGDLNGVTA KLDYLQSLGV SGIWLMPINP SPSYHGYDIT
110 120 130 140 150
DYEGINPQYG TMADFEKLVS EAHKRGIEVI LDLVINHTSD QHPWFKAALD
160 170 180 190 200
PKDAHRSWYT WAGPGTNLKA VSAVGGPAWH ANGKQHYLGD FTGAMPDLNY
210 220 230 240 250
DEPAVRREMI AVGKFWLDKG ADGFRLDAAR HIYDDLESDN GQPAVIARNA
260 270 280 290 300
QWWNEFRQGL RQVRPDVYLV GEVSAKQPGE LAPYLPALGS VFDFPLAEQL
310 320 330 340 350
IASAGQEKAG KLPALLTETY AAFRAAAGDD YADAPFLSNH DQERVLSQLG
360 370 380 390 400
GDLRHMRTAA AMLLTLPGRP YLYYGEEIGM LGRKPDENLR EPMRWQRQAG
410 420 430 440 450
APGDSRWKPY SVKQGGEVSV QAEQDRPDSL LSFYRTLIHW RVEVPALRDG
460 470 480 490 500
ALRVVDTGAP ALVAYERVTA DSRALVVHNL SGKPASMKLG ADRAKAFAAI
510 520
RLHSAPGATL TEGRLTVPAY ATVVLQ
Length:526
Mass (Da):57,458
Last modified:November 1, 1996 - v1
Checksum:i77EA93C1818FD13C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D38228 Genomic DNA. Translation: BAA07401.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D38228 Genomic DNA. Translation: BAA07401.1.

3D structure databases

ProteinModelPortaliQ60102.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR006046. Alpha_amylase.
IPR022567. DUF3459.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 2 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
PF11941. DUF3459. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Expression of periplasmic alpha-amylase of Xanthomonas campestris K-11151 in Escherichia coli and its action on maltose."
    Abe J., Shibata Y., Fujisue M., Hizukuri S.
    Microbiology (Mosc.) 142:1505-1512(1996)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: K-11151Imported.

Entry informationi

Entry nameiQ60102_XANCA
AccessioniPrimary (citable) accession number: Q60102
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.