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Protein

Beta-xylanase

Gene

xynA

Organism
Thermoanaerobacterium thermosulfurigenes (Clostridium thermosulfurogenes)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradationUniRule annotation

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
CBM9. Carbohydrate-Binding Module Family 9.
GH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:xynAImported
OrganismiThermoanaerobacterium thermosulfurigenes (Clostridium thermosulfurogenes)Imported
Taxonomic identifieri33950 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisThermoanaerobacterium

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3232Sequence analysisAdd
BLAST
Chaini33 – 12341202Beta-xylanaseSequence analysisPRO_5004265970Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ60046.
SMRiQ60046. Positions 858-1042.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini351 – 674324GH10 (glycosyl hydrolase family 10)InterPro annotationAdd
BLAST
Domaini1050 – 111364SLH (S-layer homology)InterPro annotationAdd
BLAST
Domaini1114 – 117259SLH (S-layer homology)InterPro annotationAdd
BLAST
Domaini1175 – 123460SLH (S-layer homology)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
2.60.40.1190. 2 hits.
3.20.20.80. 1 hit.
InterProiIPR010502. Carb-bd_dom_fam9.
IPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR031158. GH10_AS.
IPR018087. Glyco_hydro_5_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR001119. SLH_dom.
[Graphical view]
PfamiPF06452. CBM9_1. 2 hits.
PF02018. CBM_4_9. 2 hits.
PF00331. Glyco_hydro_10. 1 hit.
PF00395. SLH. 3 hits.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
PS00659. GLYCOSYL_HYDROL_F5. 1 hit.
PS51272. SLH. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q60046-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSIVNRVVS IVTALIMIFG TSLLSQHIRA FADDTNTNLV SNGDFETGTI
60 70 80 90 100
DGWIKQGNPT LEVTTEQAIG QYSMKVTGRT QTYEGPAYSF LGKMQKGESY
110 120 130 140 150
NVSLKVRLVS GQNSSNPFIT VTMFREDDNG KHYDTIVWQK QVSEDSWTTV
160 170 180 190 200
SGTYTLDYTG TLKTLYMYVE SPDPTLEYYI DDVVVTPQNP IQVGNVITNG
210 220 230 240 250
TFENGNTSGW VGTGSSVVKA VYGVAHSGGY SLLTTGRTAN WNGPSYDLTG
260 270 280 290 300
KIVPGQQYNV DFWVKFVNGN DTEQIKATVK ATSNKDNYIQ VNDFVNVNKG
310 320 330 340 350
EWTEIKGSFT LPVTDYSGVS IYVESQNPTL EFYIDDFSVI GEISNNQITI
360 370 380 390 400
QNDIPDLYSV FKDYFPIGVA VDSSRLNDAD PHAQLTAKHF NMLVAENAMK
410 420 430 440 450
PESLQPTEGN FTFDNADKIV DYEIAHNMKM RGHTLLWHNQ VPDWFFQDPS
460 470 480 490 500
DPSKPASRDL LLQRLRTHIT TVLDHFKTKY GSQNPIIGWD VVNEVLDDNG
510 520 530 540 550
NLRNSKWLQI IGPDYIEKAF EYAHEADPSM KLFINDYNIE NNGVKTQAMY
560 570 580 590 600
DLVKKLKSEG VPINGIGMQM HISINSNIDN IKASIEKLAS LGVEIQVTEL
610 620 630 640 650
DMNMNGNVSN DALLKQARLY KQLFDLFKAE KQYITAVVFW GVSDDVSWLS
660 670 680 690 700
KPNAPLLFDS KLQAKPAYWA IVDQGKAIPD IQSAKALEGS PTIGANVDSS
710 720 730 740 750
WKLVKPLYAN TYVKGTIGAT AAVKSMWDTK NLYLLVQVSD NTPSNNDGIE
760 770 780 790 800
IFVDKNDNKS TTYESDDEHY IVKRDGTGSS NITKYVMSNA DGYVAQIAIP
810 820 830 840 850
IEDISPVLND KIGFDIRIND DQGSGNINAI TVWNDYTNSQ DTNTAYFGDL
860 870 880 890 900
VLSKPAQIAT AIYGTPVIDG KVDGIWNNAE AISTNTWVLG SNGATATAKM
910 920 930 940 950
MWDDKYLYIL ADVTDNNLNK SSVNPYEQDS VEVFVDQNND KTTYYENDDG
960 970 980 990 1000
QFRVNYDNEQ SFGGSTNSNG FKSATSLTQN GYIVEEAIPW TSITPSNGTI
1010 1020 1030 1040 1050
IGFDLQVNDA DENGKRTGIV TWCDPSGNSW QDTSGFGNLM LTGKPSGVLK
1060 1070 1080 1090 1100
KVVAFNDIKD NWAKDVIEVL ASRHIVEGMT DTQYEPNKTV TRAEFTAMIL
1110 1120 1130 1140 1150
RLLNIKEEAY SGEFSDVKSG DWYANAIEAA YKTGIIEGDG KNARPNDSIT
1160 1170 1180 1190 1200
REEMTAIAMR AYEMLTQYEE ENIGATTFSD DKSISDWARN VVANAAKLGI
1210 1220 1230
VNGEPNNVFA PKGNATRAEA AAIIYGLLEK TNKL
Length:1,234
Mass (Da):136,625
Last modified:November 1, 1996 - v1
Checksum:i3A6B45854133113A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U50952 Genomic DNA. Translation: AAB08046.1.
PIRiS72640.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U50952 Genomic DNA. Translation: AAB08046.1.
PIRiS72640.

3D structure databases

ProteinModelPortaliQ60046.
SMRiQ60046. Positions 858-1042.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM22. Carbohydrate-Binding Module Family 22.
CBM9. Carbohydrate-Binding Module Family 9.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.260. 2 hits.
2.60.40.1190. 2 hits.
3.20.20.80. 1 hit.
InterProiIPR010502. Carb-bd_dom_fam9.
IPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR031158. GH10_AS.
IPR018087. Glyco_hydro_5_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR001119. SLH_dom.
[Graphical view]
PfamiPF06452. CBM9_1. 2 hits.
PF02018. CBM_4_9. 2 hits.
PF00331. Glyco_hydro_10. 1 hit.
PF00395. SLH. 3 hits.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
PS00659. GLYCOSYL_HYDROL_F5. 1 hit.
PS51272. SLH. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ60046_THETU
AccessioniPrimary (citable) accession number: Q60046
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 13, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.