Unreviewed, UniProtKB/TrEMBL Q60043 (Q60043_9FIRM)

Names and origin

Protein names

Submitted name:
    Endoxylanase EMBL AAC43719.1
    EC=3.2.1.8

Gene names

Name:

xynA EMBL AAC43719.1

Organism

Thermoanaerobacterium EMBL AAC43719.1

Taxonomic identifier

28895 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacterales Family III. Incertae Sedis

Protein attributes

Sequence length	1348 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432V0

Ontologies

Keywords
Biological process	Xylan degradation
Domain	Signal
Molecular function	Glycosidase RuleBase RU003432V0 Hydrolase
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 32	32	Potential EMBL AAC43719.1
	Chain	33 – 1348	1316	Potential EMBL AAC43719.1		PRO_5000144612

Sequences

	Sequence		Length	Mass (Da)
	Q60043-1 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: D0C55E9E539F8E50	FASTA	1,348	148,376
	10 20 30 40 50 60 MKSIVNRVVS IVTALIMIFG TSLFSQHIRA FADDTNTNLV SNGDFETGTI DGWIKQGNPT 70 80 90 100 110 120 LEVTTEQAIG QYSMRVTGRT QTYEGPAYSF LGKMQKGESY NVSLKVRLVS EQNSSNPFIT 130 140 150 160 170 180 VTMFREDDDG KHYDTIVCQK QVSEDSWTTV SGTYTLDYTG TLKTLYMYVE SPDPTLEYYI 190 200 210 220 230 240 DDVVVTPQNP IQVGNVITNG TFENGNTSGW VGTGSSVVKA VYGVSHIGGY SLLTTGRTAN 250 260 270 280 290 300 WNGPSYDLTA KIVPGQQHNV DFWVKFVNGN DTEQIKATVK STSDKGNYIR VNDFANVNRG 310 320 330 340 350 360 EWTEIKGSFT LPVADYSGVS IYVESRNPTL EKNNDDFSVK GEISNKQITI QNDIPDLYSV 370 380 390 400 410 420 LKDYFPIGVA VDPSRLNDAE AHAQLTARHF NMLAAANAMK PESLQPTEGN FAFDNADKIV 430 440 450 460 470 480 DYAIAHNMKM RGHTLLWHNQ VPDWVFQEPS DPSKPSSRDL LRQRLSTHIT AVLEHIQTKC 490 500 510 520 530 540 GSLDPIGGWD VVNEVLDESG NLRNPTWLQI IGPDYIDKAS EYAHEGDPSM TSFITYHNIE 550 560 570 580 590 600 NGVKTQAMYD LVKKLKNEGV PINGIGMQMH ISINSNIDNI KASIEKLASL GVEIQVTELD 610 620 630 640 650 660 MNMNGDVSND ALLKQARLYK QLFDLFKAEK HYITDVVFRG VSDDVSWLSK PNAPLLFDSK 670 680 690 700 710 720 LQAKPAYWAI VDPGKAIPDI QSAKALEGSP TIGANVDSSW KLVKPLDANT YVKGTIGATA 730 740 750 760 770 780 AVKSMWDTKN LYLLVQISDN TPSNNDGIEI SVDKNDNKST TYESDDEHYI AKRDGTGSSN 790 800 810 820 830 840 ITKYVMSNAD GYVAQIAIPI EDISPVLNDK LGFDIRINDD QGSGNVTAIT AWNDYTNSQD 850 860 870 880 890 900 TNTAYFGDLV LSKPAQIATA IYGTPVIDGK VDGVWNNPEA ISTNTWVLGS NGATATAKMM 910 920 930 940 950 960 WDDKYLYILA DVTDNNLNKS SVNPYEQDSV EVFVDQNNDK TTYYENDDGQ LRVNYDNEQS 970 980 990 1000 1010 1020 FGGSTNSNGF KSATSLTQNG YIVEEAIPWT SITPLNGTII GFDLQVNDAD ENGKRTGIVT 1030 1040 1050 1060 1070 1080 WCDPSGNSWQ ATSGFGNLML TGKPSVIKSD NASIALTEDA LNRNQIQCGV DVSIKDTWKA 1090 1100 1110 1120 1130 1140 NVTNYVTLAN VVDMTISGSS GNVALPKPVE VTLNISIAND PRRVAVYYYN PATNQWEYVG 1150 1160 1170 1180 1190 1200 GKVDASSGTM TFDATHFSQY AAFEYDETFN DIKDNWPKDV IEVLASRHIV EGMTDTQYEP 1210 1220 1230 1240 1250 1260 NKTVARAEFT AMILRLLNIE EEAYSGEFSD VKSGDWYADA IEAAYKAGII EGDGKNARPY 1270 1280 1290 1300 1310 1320 DSITREEMTA IPMRAYEMLT QYREENIGAT TFSDDKSISD WARNVVANAA KLGIVNGEPN 1330 1340 NVFAPKGNAT RAEAAAIICG LLEKTNNL

References

[1]

"Cloning, sequencing, and expression of the gene encoding a large S-layer-associated endoxylanase from Thermoanaerobacterium sp. strain JW/SL-YS 485 in Escherichia coli." Liu S.Y., Gherardini F.C., Matuschek M., Bahl H., Wiegel J. J. Bacteriol. 178:1539-1547(1996) [PubMed: 8626279] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: JW/SL-YS 485 EMBL AAC43719.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U27183 Genomic DNA. Translation: AAC43719.1.
3D structure databases
HSSP	HSSP built from PDB template 1I8A based on UniProtKB Q60037.
ModBase	Search...
Protein family/group databases
CAZy	CBM22. Carbohydrate-Binding Module Family 22. CBM9. Carbohydrate-Binding Module Family 9. GH10. Glycoside Hydrolase Family 10.
Family and domain databases
InterPro	IPR010502. Carb-bd_9. IPR015922. Carb-bd_9-like. IPR003305. CenC_carb_bd. IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_sg_catalytic. IPR001119. SLH. [Graphical view]
Gene3D	G3DSA:2.60.40.1190. CBD9. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF02018. CBM_4_9. 2 hits. PF06452. DUF1083. 2 hits. PF00331. Glyco_hydro_10. 1 hit. PF00395. SLH. 3 hits. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
PROSITE	PS00591. GLYCOSYL_HYDROL_F10. 1 hit. PS51272. SLH. 3 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q60043_9FIRM

Accession

Primary (citable) accession number: Q60043

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	June 16, 2009
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)