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Q60041

- XYNB_THENE

UniProt

Q60041 - XYNB_THENE

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Protein

Endo-1,4-beta-xylanase B

Gene
xynB
Organism
Thermotoga neapolitana
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei153 – 1531Proton donor By similarity
Active sitei259 – 2591Nucleophile By similarity

GO - Molecular functioni

  1. endo-1,4-beta-xylanase activity Source: UniProtKB-EC

GO - Biological processi

  1. xylan catabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradation

Protein family/group databases

CAZyiGH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Endo-1,4-beta-xylanase B (EC:3.2.1.8)
Short name:
Xylanase B
Alternative name(s):
1,4-beta-D-xylan xylanohydrolase B
Gene namesi
Name:xynB
OrganismiThermotoga neapolitana
Taxonomic identifieri2337 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919 Reviewed predictionAdd
BLAST
Chaini20 – 346327Endo-1,4-beta-xylanase BPRO_0000007988Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ60041.
SMRiQ60041. Positions 23-346.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. Glyco_hydro_10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q60041-1 [UniParc]FASTAAdd to Basket

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MKGLPALLLL LIGCVSSFGS QDVPLRVLAE KLNIHIGFAA GNNFWSLPDA    50
EKYMEVAKRE FNILTPGNQM KWDTIHPERN RYNFEPAEKH VEFALKNDMI 100
VHGHTLVWHN QLPGWLTGQE WSKEELLNIL EDHVKTVVSH FRGRVKIWDV 150
VNEAVSDSGT YRESIWYRTI GPEYIEKALI WAKEADPDAI LIYNDYNIEE 200
INAKSNFVYN MIKNLREKGV PIDGIGFQMH IDYRGINYES FKKNLERFAE 250
LGLQIYITEM DRGFPLGGSV GYYLKKQAEV YRRIFEICLD NPAVRAIQFW 300
GFTDKYSWVP GFFKGYGKAL IFDENYNPKP CYFAIRELME EKLKER 346
Length:346
Mass (Da):40,338
Last modified:November 1, 1997 - v1
Checksum:i5E96C39D46173595
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z49961 Genomic DNA. Translation: CAA90235.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z49961 Genomic DNA. Translation: CAA90235.1 .

3D structure databases

ProteinModelPortali Q60041.
SMRi Q60041. Positions 23-346.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001000. Glyco_hydro_10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF00331. Glyco_hydro_10. 1 hit.
[Graphical view ]
PRINTSi PR00134. GLHYDRLASE10.
SMARTi SM00633. Glyco_10. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Zverlov V., Piotukh K., Velikodvorskaja G., Goetz F., Borriss R.
    Submitted (DEC-1995) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: Z2706-MC24.

Entry informationi

Entry nameiXYNB_THENE
AccessioniPrimary (citable) accession number: Q60041
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: February 19, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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