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Protein
Submitted name:

Virginiae butanolide receptor

Gene

barA

Organism
Streptomyces virginiae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Virginiae butanolide receptorImported
Gene namesi
Name:barAImported
OrganismiStreptomyces virginiaeImported
Taxonomic identifieri1961 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces

Structurei

3D structure databases

ProteinModelPortaliQ60011.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini16 – 76HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q60011-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVRHERVAV RQERAVRTRQ AIVRAAASVF DEYGFEAATV AEILSRASVT
60 70 80 90 100
KGAMYFHFAS KEELARGVLA EQTLHVAVPE SGSKAQELVD LTMLVAHGML
110 120 130 140 150
HDPILRAGTR LALDQGAVDF SDANPFGEWG DICAQLLAEA QERGEVLPHV
160 170 180 190 200
NPKKTGDFIV GCFTGLQAVS RVTSDRQDLG HRISVMWNHV LPSIVPASML
210 220 230
TWIETGEERI GKVAAAAEAA EAAEASEAAS DE
Length:232
Mass (Da):25,001
Last modified:November 1, 1996 - v1
Checksum:iE13C0087CA900680
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D32251 Genomic DNA. Translation: BAA06981.1.
PIRiA57507.
RefSeqiWP_051763258.1. NZ_JNYC01000011.1.

Genome annotation databases

GeneIDi27750857.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D32251 Genomic DNA. Translation: BAA06981.1.
PIRiA57507.
RefSeqiWP_051763258.1. NZ_JNYC01000011.1.

3D structure databases

ProteinModelPortaliQ60011.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi27750857.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ60011_STRVG
AccessioniPrimary (citable) accession number: Q60011
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 30, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.