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Protein
Submitted name:

Transcriptional regulator, TetR family

Gene

lpg1967

Organism
Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciLPNE272624:GHDI-1966-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, TetR familyImported
Gene namesi
Ordered Locus Names:lpg1967Imported
OrganismiLegionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)Imported
Taxonomic identifieri272624 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesLegionellaceaeLegionella
Proteomesi
  • UP000000609 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PaxDbiQ5ZU41.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ON4X-ray1.85A/B/C/D/E/F/G/H1-188[»]
ProteinModelPortaliQ5ZU41.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5ZU41.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 6661HTH tetR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105KHT. Bacteria.
ENOG4111U45. LUCA.
HOGENOMiHOG000116462.
KOiK16137.
OMAiKHHINGL.
OrthoDBiEOG689HR5.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5ZU41-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPMNISNTKE RILAVAEALI QKDGYNAFSF KDIATAINIK TASIHYHFPS
60 70 80 90 100
KEDLGVAVIS WHTDKIAAVL SDISNNSSLS AKEKIQKFFD AILTLTYNSE
110 120 130 140 150
NKMCLGGMFA SDFQSLPVSI QNQAKKFFEL IIEWLKGVLE TNGYDNESSL
160 170 180
SLAKQIISLV EGGLLLARLY GDETFLEGVR HFIDQTIK
Length:188
Mass (Da):20,928
Last modified:November 23, 2004 - v1
Checksum:i8E5222ACFF698847
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017354 Genomic DNA. Translation: AAU28036.1.
RefSeqiWP_010947683.1. NC_002942.5.
YP_095983.1. NC_002942.5.

Genome annotation databases

EnsemblBacteriaiAAU28036; AAU28036; lpg1967.
GeneIDi19833533.
KEGGilpn:lpg1967.
PATRICi22331096. VBILegPne29832_2059.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017354 Genomic DNA. Translation: AAU28036.1.
RefSeqiWP_010947683.1. NC_002942.5.
YP_095983.1. NC_002942.5.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ON4X-ray1.85A/B/C/D/E/F/G/H1-188[»]
ProteinModelPortaliQ5ZU41.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ5ZU41.

Protocols and materials databases

DNASUi3078466.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU28036; AAU28036; lpg1967.
GeneIDi19833533.
KEGGilpn:lpg1967.
PATRICi22331096. VBILegPne29832_2059.

Phylogenomic databases

eggNOGiENOG4105KHT. Bacteria.
ENOG4111U45. LUCA.
HOGENOMiHOG000116462.
KOiK16137.
OMAiKHHINGL.
OrthoDBiEOG689HR5.

Enzyme and pathway databases

BioCyciLPNE272624:GHDI-1966-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ5ZU41.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Philadelphia 1 / ATCC 33152 / DSM 7513Imported.
  2. "Crystal structure of TetR transcriptional regulator from Legionella pneumophila."
    Michalska K., Li H., Gu M., Joachimiak A.
    Submitted (AUG-2010) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.85 ANGSTROMS).

Entry informationi

Entry nameiQ5ZU41_LEGPH
AccessioniPrimary (citable) accession number: Q5ZU41
Entry historyi
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: March 16, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.