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Protein

UPF0176 protein lpg2838

Gene

lpg2838

Organism
Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei177 – 1771Cysteine persulfide intermediateUniRule annotation

Enzyme and pathway databases

BioCyciLPNE272624:GHDI-2836-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0176 protein lpg2838UniRule annotation
Gene namesi
Ordered Locus Names:lpg2838
OrganismiLegionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Taxonomic identifieri272624 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaLegionellalesLegionellaceaeLegionella
Proteomesi
  • UP000000609 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 254254UPF0176 protein lpg2838PRO_0000161484Add
BLAST

Proteomic databases

PaxDbiQ5ZRP2.

Interactioni

Protein-protein interaction databases

STRINGi272624.lpg2838.

Structurei

Secondary structure

1
254
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi4 – 129Combined sources
Helixi18 – 3215Combined sources
Beta strandi35 – 417Combined sources
Beta strandi44 – 518Combined sources
Helixi53 – 6311Combined sources
Helixi67 – 693Combined sources
Beta strandi75 – 817Combined sources
Beta strandi85 – 917Combined sources
Beta strandi93 – 964Combined sources
Helixi115 – 1217Combined sources
Beta strandi127 – 1315Combined sources
Helixi135 – 1406Combined sources
Beta strandi141 – 1433Combined sources
Helixi154 – 1563Combined sources
Helixi157 – 1648Combined sources
Helixi166 – 1683Combined sources
Beta strandi173 – 1764Combined sources
Beta strandi178 – 1803Combined sources
Helixi181 – 19313Combined sources
Beta strandi196 – 2016Combined sources
Helixi204 – 2118Combined sources
Turni214 – 2163Combined sources
Beta strandi219 – 2213Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4F67X-ray1.79A1-254[»]
ProteinModelPortaliQ5ZRP2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini123 – 21795RhodaneseUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the UPF0176 family.UniRule annotation
Contains 1 rhodanese domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C72. Bacteria.
COG1054. LUCA.
HOGENOMiHOG000034808.
KOiK07146.
OMAiQGHDDEG.
OrthoDBiEOG6ND0G7.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176.
InterProiIPR001763. Rhodanese-like_dom.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5ZRP2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKDIIIASFY KFIPLNDFES LREPILTKMH EIGIKGTIIL AHEGVNGGFA
60 70 80 90 100
GNREQMNVFY DYLRSDSRFA DLHFKETYDN KNPFDKAKVK LRKEIVTMGV
110 120 130 140 150
QKVDPSYNAG TYLSPEEWHQ FIQDPNVILL DTRNDYEYEL GTFKNAINPD
160 170 180 190 200
IENFREFPDY VQRNLIDKKD KKIAMFCTGG IRCEKTTAYM KELGFEHVYQ
210 220 230 240 250
LHDGILNYLE SIPESESLWE GKCFVFDDRV AVDQKLDRVY PQLPQDYKYE

REQK
Length:254
Mass (Da):29,904
Last modified:November 23, 2004 - v1
Checksum:iD71F02C16B6FEAC4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017354 Genomic DNA. Translation: AAU28886.1.
RefSeqiWP_010948525.1. NC_002942.5.
YP_096833.1. NC_002942.5.

Genome annotation databases

EnsemblBacteriaiAAU28886; AAU28886; lpg2838.
GeneIDi19834403.
KEGGilpn:lpg2838.
PATRICi22333057. VBILegPne29832_3023.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017354 Genomic DNA. Translation: AAU28886.1.
RefSeqiWP_010948525.1. NC_002942.5.
YP_096833.1. NC_002942.5.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4F67X-ray1.79A1-254[»]
ProteinModelPortaliQ5ZRP2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272624.lpg2838.

Proteomic databases

PaxDbiQ5ZRP2.

Protocols and materials databases

DNASUi3079754.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU28886; AAU28886; lpg2838.
GeneIDi19834403.
KEGGilpn:lpg2838.
PATRICi22333057. VBILegPne29832_3023.

Phylogenomic databases

eggNOGiENOG4105C72. Bacteria.
COG1054. LUCA.
HOGENOMiHOG000034808.
KOiK07146.
OMAiQGHDDEG.
OrthoDBiEOG6ND0G7.

Enzyme and pathway databases

BioCyciLPNE272624:GHDI-2836-MONOMER.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176.
InterProiIPR001763. Rhodanese-like_dom.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Philadelphia 1 / ATCC 33152 / DSM 7513.

Entry informationi

Entry nameiY2838_LEGPH
AccessioniPrimary (citable) accession number: Q5ZRP2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: November 23, 2004
Last modified: November 11, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.