Q5ZME5 (Q5ZME5_CHICK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSGALP00000023943

Gene names

Name:	SERINC1 Ensembl ENSGALP00000023943
ORF Names:	RCJMB04_2f12 EMBL CAG31098.1

Organism

Gallus gallus (Chicken) [Reference proteome]

Taxonomic identifier

9031 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Sauropsida › Sauria › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galliformes › Phasianidae › Phasianinae › Gallus

Protein attributes

Sequence length	461 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5ZME5 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: A2341C48C261DA7F	FASTA	461	51,386
	10 20 30 40 50 60 MGGVLGLCSM ASWIPCLCGS APCLLCRCCP SGNNSTITRL IYAFFLLLGV SVACVMLIPG 70 80 90 100 110 120 MEEQLKKIPG FCDGGMGTTI PGVHGHVNCD VLVGYKAVYR VCFGMAMFFL LFSLLMIKVK 130 140 150 160 170 180 SSNDPRAAVH NGFWFFKFAT ALAISVGAFF IPEGPFTTVW FYVGMSGAFC FILIQLVLLI 190 200 210 220 230 240 DFAHSWNESW VEKMEEGNSR CWYAALLSAT AVNYLLSLVA IVLFYVYYTH PEGCSENKTF 250 260 270 280 290 300 ISVNMLLCIG ASVMSILPRI QESQPRSGLL QSSVITIYTM YLTWSAMTNE PDRRCNPSLL 310 320 330 340 350 360 SIIGYNTTTI PTQGQVVQWW DAQGIVGLIL FLLCVLYSSI RTSNNSQVNK LMLTSDESTL 370 380 390 400 410 420 IEDGMPRNDG SLDDGDDVHR AIDNERDGVT YSYSFFHFML FLASLYIMMT LTNWYSPDST 430 440 450 460 YETMTSKWPS VWVKISSSWI GIVLYVWTLV APLVLTNRDF D

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution." International Chicken Genome Sequencing Consortium Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K. Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Red jungle fowl Ensembl ENSGALP00000023943.
[2]	"Full-length cDNAs from chicken bursal lymphocytes to facilitate genefunction analysis." Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P., Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P., Hayashizaki Y., Buerstedde J.M. Genome Biol. 6:R6-R6(2005) Cited for: NUCLEOTIDE SEQUENCE. Strain: CB EMBL CAG31098.1. Tissue: Bursa EMBL CAG31098.1.
[3]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Red jungle fowl Ensembl ENSGALP00000023943.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AADN02001931 Genomic DNA. No translation available. AADN02001932 Genomic DNA. No translation available. AADN02001933 Genomic DNA. No translation available. AJ719439 mRNA. Translation: CAG31098.1.
IPI	IPI00651457.
RefSeq	NP_001026245.1. NM_001031074.1.
UniGene	Gga.13066.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	9031.ENSGALP00000023943.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSGALT00000023989; ENSGALP00000023943; ENSGALG00000014868.
GeneID	421722.
KEGG	gga:421722.
Organism-specific databases
CTD	57515.
Phylogenomic databases
eggNOG	NOG308011.
GeneTree	ENSGT00550000074522.
HOGENOM	HOG000165463.
HOVERGEN	HBG025699.
InParanoid	Q5ZME5.
OMA	HVNCDVL.
OrthoDB	EOG4S4PGF.
Family and domain databases
InterPro	IPR005016. TMS_TDE. [Graphical view]
PANTHER	PTHR10383. PTHR10383. 1 hit.
Pfam	PF03348. Serinc. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20824452.

Entry information

Entry name

Q5ZME5_CHICK

Accession

Primary (citable) accession number: Q5ZME5

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	April 3, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)