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Q5ZKK8 (Q5ZKK8_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribosomal protein L19 RuleBase RU000574
Gene names
Name:Gga.4674 Ensembl ENSGALP00000039326
ORF Names:RCJMB04_10e3 EMBL CAG31735.1
OrganismGallus gallus (Chicken) EMBL CAG31735.1
Taxonomic identifier9031 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galliformes › Phasianidae › Phasianinae › Gallus

Protein attributes

Sequence length196 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L19e family. RuleBase RU000574

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein RuleBase RU000574
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5ZKK8 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 4154062832F90307

FASTA19623,413
        10         20         30         40         50         60 
MSMLRLQKRL ASSVLCCGKK KVWLDPNETN EIANANSRQQ IRKLIKDGLI IRKPVTVHSR 

        70         80         90        100        110        120 
ARCRKNTLAR RKGRHMGIGK RKGTANARMP EKVTWMRRMR ILRRLLRRYR ESKKIDRHMY 

       130        140        150        160        170        180 
HSLYLKVKGN VFKNKRILME HIHKLKADKA RKKLLADQAE ARRSKTKEAR KRREERLQAK 

       190 
KEEIIKTLSK EEETKK

« Hide

References

« Hide 'large scale' references
[1]"Full-length cDNAs from chicken bursal lymphocytes to facilitate genefunction analysis."
Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P., Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P., Hayashizaki Y., Buerstedde J.M.
Genome Biol. 6:R6-R6(2005)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CB EMBL CAG31735.1.
Tissue: Bursa EMBL CAG31735.1.
[2]"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
International Chicken Genome Sequencing Consortium
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. expand/collapse author list , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
Nature 432:695-716(2004) [PubMed: 15592404] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Red jungle fowl Ensembl ENSGALP00000039326.
[3]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000039326.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AADN02022237 Genomic DNA. No translation available.
AADN02022238 Genomic DNA. No translation available.
AJ720076 mRNA. Translation: CAG31735.1.
IPIIPI00589603.
RefSeqNP_001026100.1. NM_001030929.1.
UniGeneGga.4674.

3D structure databases

ProteinModelPortalQ5ZKK8.
SMRQ5ZKK8. Positions 9-191.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5ZKK8.

Proteomic databases

PRIDEQ5ZKK8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000040117; ENSGALP00000039326; ENSGALG00000001658.
GeneID420003.
KEGGgga:420003.

Organism-specific databases

CTD6143.

Phylogenomic databases

eggNOGveNOG19255.
HOGENOMHBG748852.
HOVERGENHBG056059.
InParanoidQ5ZKK8.
OMAAGKIDKH.
PhylomeDBQ5ZKK8.

Family and domain databases

InterProIPR000196. Ribosomal_L19/L19e.
IPR023638. Ribosomal_L19/L19e_CS.
IPR015972. Ribosomal_L19/L19e_dom1.
IPR015974. Ribosomal_L19/L19e_dom3.
[Graphical view]
Gene3DG3DSA:1.10.1650.10. Ribosomal_L19/L19e_dom1. 1 hit.
G3DSA:1.10.1200.60. Ribosomal_L19/L19e_dom3. 1 hit.
KOK02885.
PfamPF01280. Ribosomal_L19e. 1 hit.
[Graphical view]
SUPFAMSSF48140. Ribosomal_L19/L19e. 1 hit.
PROSITEPS00526. RIBOSOMAL_L19E. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5ZKK8_CHICK
AccessionPrimary (citable) accession number: Q5ZKK8
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: November 16, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info