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Protein

Rab9 effector protein with kelch motifs

Gene

RABEPK

Organism
Gallus gallus (Chicken)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Rab9 effector required for endosome to trans-Golgi network (TGN) transport.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Rab9 effector protein with kelch motifs
Gene namesi
Name:RABEPK
ORF Names:RCJMB04_20p14
OrganismiGallus gallus (Chicken)
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Unplaced

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002806191 – 371Rab9 effector protein with kelch motifsAdd BLAST371

Proteomic databases

PaxDbiQ5ZJ37.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000001477.

Structurei

3D structure databases

ProteinModelPortaliQ5ZJ37.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati47 – 93Kelch 1Add BLAST47
Repeati98 – 144Kelch 2Add BLAST47
Repeati149 – 201Kelch 3Add BLAST53
Repeati202 – 251Kelch 4Add BLAST50
Repeati252 – 301Kelch 5Add BLAST50
Repeati348 – 371Kelch 6Add BLAST24

Keywords - Domaini

Kelch repeat, Repeat

Phylogenomic databases

eggNOGiKOG0379. Eukaryota.
ENOG410Y5WM. LUCA.
HOGENOMiHOG000231970.
HOVERGENiHBG080504.
InParanoidiQ5ZJ37.
KOiK20285.
PhylomeDBiQ5ZJ37.

Family and domain databases

Gene3Di2.130.10.80. 3 hits.
InterProiView protein in InterPro
IPR037293. Gal_Oxidase_b-propeller.
IPR015915. Kelch-typ_b-propeller.
IPR006652. Kelch_1.
SMARTiView protein in SMART
SM00612. Kelch. 2 hits.
SUPFAMiSSF117281. SSF117281. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5ZJ37-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGPRVLPLLE PGCRPQAGKW YRMAPRGEWP RGRVGHGCLF VPGGSGRVLL
60 70 80 90 100
LGGADPAGAF ADAHFVELGA HLWAPAAWSG LRPRYEHATF LSACRPPRLW
110 120 130 140 150
VFGGAHRAGN RSCVQVLDPE IGTWESPEVT GIPPLPRTFH TSSAAIGDCL
160 170 180 190 200
YVFGGGDKGA EPVKDQQLHV FDTVALAWTQ PDTHGDPPSP RHGHVVVAVG
210 220 230 240 250
TKLFIHGGLA GDIFYNDLFC IDTTDMKWVK IAATGDVPGG RASHSSAVFK
260 270 280 290 300
DHLYIFGGIG PDGTLDTTYK YHIEEQQWTL LQFDSPLPAG RLDHAMCVIP
310 320 330 340 350
WRVGKNGDAA AVSKEDKAEP TASAGDRAGH LCRGQDKKAC TEDTMMHLLL
360 370
IFGGMDTQAE IYRDCIVSLI E
Length:371
Mass (Da):40,060
Last modified:November 23, 2004 - v1
Checksum:iEFD89D711A5A5C6F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ720597 mRNA. Translation: CAG32256.1.
RefSeqiNP_001074360.1. NM_001080891.1.
UniGeneiGga.1275.

Genome annotation databases

GeneIDi772357.
KEGGigga:772357.

Similar proteinsi

Entry informationi

Entry nameiRABEK_CHICK
AccessioniPrimary (citable) accession number: Q5ZJ37
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: November 23, 2004
Last modified: November 22, 2017
This is version 66 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome