Q5ZHW2 (Q5ZHW2_CHICK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSGALP00000024777

Gene names

Name:	Gga.4155 Ensembl ENSGALP00000024777
ORF Names:	RCJMB04_32k8 EMBL CAG32681.1

Organism

Gallus gallus (Chicken) EMBL CAG32681.1

Taxonomic identifier

9031 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galliformes › Phasianidae › Phasianinae › Gallus

Protein attributes

Sequence length	275 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	activation of innate immune response Traceable author statement. Source: Reactome
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5ZHW2 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: AD3421F4ECB5F8D2	FASTA	275	32,478
	10 20 30 40 50 60 MTDDKDVLRD VWFGRIPTCF TLYQDEITER EAEPYYLLLP RISYLTLVTD KVKKHFQKVM 70 80 90 100 110 120 RQEEVNEIWF EYEGTPLKWH YPIGLLFDLH ASNTALPWSI TVHFKNFPEK DLLHCHSKDV 130 140 150 160 170 180 IEAHFMACIK EADALKHKSQ VINEMQKKDH KQLWMGLQND KFEQFWAINR KLMEYPPEDS 190 200 210 220 230 240 GFRYIPFRIY QATTERPFIQ KLFRPIASGG QLHTLGDLLK DVCPSAITPE DGEKTTQVMI 250 260 270 HGIEPMLETP LQWLSEHMSY PDNFLHISII PRPTD

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Full-length cDNAs from chicken bursal lymphocytes to facilitate genefunction analysis." Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P., Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P., Hayashizaki Y., Buerstedde J.M. Genome Biol. 6:R6-R6(2005) Cited for: NUCLEOTIDE SEQUENCE. Strain: CB EMBL CAG32681.1. Tissue: Bursa EMBL CAG32681.1.
[2]	"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution." International Chicken Genome Sequencing Consortium Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K. Nature 432:695-716(2004) [PubMed: 15592404] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Red jungle fowl Ensembl ENSGALP00000024777.
[3]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Red jungle fowl Ensembl ENSGALP00000024777.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC147720 Genomic DNA. No translation available. AJ721022 mRNA. Translation: CAG32681.1.
IPI	IPI00582382.
RefSeq	NP_001006409.1. NM_001006409.1.
UniGene	Gga.4155.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q5ZHW2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSGALT00000024823; ENSGALP00000024777; ENSGALG00000015387.
GeneID	421784.
KEGG	gga:421784.
Organism-specific databases
CTD	9474.
Phylogenomic databases
eggNOG	veNOG06196.
GeneTree	ENSGT00390000004766.
HOGENOM	HBG378773.
HOVERGEN	HBG018731.
InParanoid	Q5ZHW2.
OMA	HFKNFPE.
OrthoDB	EOG4T783Z.
PhylomeDB	Q5ZHW2.
Enzyme and pathway databases
Reactome	REACT_75835. RLR (RIG-like receptor) mediated induction of IFN alpha/beta.
Family and domain databases
InterPro	IPR007239. Autophagy-rel_prot_5. [Graphical view]
KO	K08339.
PANTHER	PTHR13040. APG5. 1 hit.
Pfam	PF04106. APG5. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5ZHW2_CHICK

Accession

Primary (citable) accession number: Q5ZHW2

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	November 16, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)