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Protein
Submitted name:

Uncharacterized protein

Gene

RCJMB04_37a17

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-GGA-265976. Homologous DNA pairing and strand exchange.
R-GGA-351451. Homologous recombination repair of replication-dependent double-strand breaks.
R-GGA-351468. Processing of DNA double-strand break ends.
R-GGA-353303. Nucleotide Excision Repair.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:RCJMB04_37a17Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ5ZHL1.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000038920.

Structurei

3D structure databases

ProteinModelPortaliQ5ZHL1.
SMRiQ5ZHL1. Positions 37-356.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini68 – 200133AAAInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0989. Eukaryota.
COG0470. LUCA.
HOGENOMiHOG000224154.
HOVERGENiHBG002053.
KOiK10755.
PhylomeDBiQ5ZHL1.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR008921. DNA_pol3_clamp-load_cplx_C.
IPR027417. P-loop_NTPase.
IPR013748. Rep_factorC_C.
[Graphical view]
PfamiPF00004. AAA. 1 hit.
PF08542. Rep_fac_C. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF48019. SSF48019. 1 hit.
SSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5ZHL1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQAFLKGPSS ISSKPPAAKE RSAAGSSGEG NKLKPVPWVE KYRPKNVDEV
60 70 80 90 100
AFQDEVVAVL KKSLEGADLP NLLFYGPPGT GKTSTILAAA RELFGPELFR
110 120 130 140 150
QRVLELNASD ERGIQVIREK VKAFAQLTAS GSRADGKVCP PFKIVILDEA
160 170 180 190 200
DSMTSAAQGA LRRTMEKESK TTRFCLICNY ISRIIEPLTS RCSKFRFKPL
210 220 230 240 250
SDKIQQQRLL DVSEKENVKI TSEAVSYLVK VSDGDLRKAI TYLQSATRLM
260 270 280 290 300
GGKEITEKTV TEIAGVIPRE TIDGLLSACS SGSFEKLETV AKNLINEGYA
310 320 330 340 350
VAQLVNQLHD IVVESEDFSD KQKSIIVEKL AEVDKCLADG ADEYLQLISL

CALVMQQLT
Length:359
Mass (Da):39,323
Last modified:November 23, 2004 - v1
Checksum:iA2F635D887AA8C2E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ721123 mRNA. Translation: CAG32782.1.
RefSeqiNP_001006550.1. NM_001006550.2.
UniGeneiGga.8038.

Genome annotation databases

GeneIDi424958.
KEGGigga:424958.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ721123 mRNA. Translation: CAG32782.1.
RefSeqiNP_001006550.1. NM_001006550.2.
UniGeneiGga.8038.

3D structure databases

ProteinModelPortaliQ5ZHL1.
SMRiQ5ZHL1. Positions 37-356.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000038920.

Proteomic databases

PaxDbiQ5ZHL1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi424958.
KEGGigga:424958.

Organism-specific databases

CTDi5984.

Phylogenomic databases

eggNOGiKOG0989. Eukaryota.
COG0470. LUCA.
HOGENOMiHOG000224154.
HOVERGENiHBG002053.
KOiK10755.
PhylomeDBiQ5ZHL1.

Enzyme and pathway databases

ReactomeiR-GGA-265976. Homologous DNA pairing and strand exchange.
R-GGA-351451. Homologous recombination repair of replication-dependent double-strand breaks.
R-GGA-351468. Processing of DNA double-strand break ends.
R-GGA-353303. Nucleotide Excision Repair.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR008921. DNA_pol3_clamp-load_cplx_C.
IPR027417. P-loop_NTPase.
IPR013748. Rep_factorC_C.
[Graphical view]
PfamiPF00004. AAA. 1 hit.
PF08542. Rep_fac_C. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF48019. SSF48019. 1 hit.
SSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ5ZHL1_CHICK
AccessioniPrimary (citable) accession number: Q5ZHL1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: June 8, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.