Reviewed, UniProtKB/Swiss-Prot Q5ZEJ0 (PAS2B_ORYSJ)

Names and origin

Protein names

Recommended name:
    Protein tyrosine phosphatase-like protein PASTICCINO 2B

Gene names

Name:	PAS2B
Ordered Locus Names:	Os01g0150200, LOC_Os01g05694
ORF Names:	P0009G03.5, OsJ_000378

Organism

Oryza sativa subsp. japonica (Rice)

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza

Protein attributes

Sequence length	221 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Function	Involved in the hormonal control of cell division and differentiation. Required for proliferation control of meristematic and non-meristematic cells. Negative regulator of the cell cycle. Anti-phosphatase that prevents CDKA;1 dephosphorylation and inactivation By similarity.
Subcellular location	Membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the PTPLA family.
Sequence caution	The sequence EAZ10553.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane
Molecular function	Developmental protein
Gene Ontology (GO)
Biological process	multicellular organismal development Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 221	221	Protein tyrosine phosphatase-like protein PASTICCINO 2B		PRO_0000372482
Regions
	Transmembrane	12 – 32	21	Potential
	Transmembrane	50 – 70	21	Potential
	Transmembrane	100 – 122	23	Potential
	Transmembrane	143 – 163	21	Potential
	Transmembrane	188 – 208	21	Potential
Experimental info
	Sequence conflict	31	1	A → T in AK099465. Ref.5

Sequences

	Sequence		Length	Mass (Da)
	Q5ZEJ0-1 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 92C56253A92265FC	FASTA	221	25,017
	10 20 30 40 50 60 MTGVGSAVRR LYLSVYNWAV FFGWAQVLYY AVTTLLESGH EAVYAAVERP LQFAQTAAFL 70 80 90 100 110 120 EILHGLVGLV RSPVSATLPQ IGSRLFLTWG ILWSFPETHS HILVTSLVIS WSITEIIRYS 130 140 150 160 170 180 FFGMKETFGF APSWLLWLRY STFMVLYPTG ISSEVGLIYI ALPYMKATEK YCLRMPNKWN 190 200 210 220 FSFDFSYASI LSLAVYVPGS PHMFTYMLAQ RKKALAKAKA A

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome sequence and structure of rice chromosome 1." Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M. , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T. Nature 420:312-316(2002) [PubMed: 12447438] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[2]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[3]	"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana." The rice annotation project (RAP) Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare.
[4]	"The genomes of Oryza sativa: a history of duplications." Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H. PLoS Biol. 3:266-281(2005) [PubMed: 15685292] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[5]	"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice." The rice full-length cDNA consortium Science 301:376-379(2003) [PubMed: 12869764] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Nipponbare.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AP002522 Genomic DNA. Translation: BAD61100.1. AP008207 Genomic DNA. Translation: BAF03946.1. CM000138 Genomic DNA. Translation: EAZ10553.1. Sequence problems. AK060935 mRNA. Translation: BAG87629.1. AK099465 mRNA. No translation available.
RefSeq	NP_001042032.1.
UniGene	Os.12757
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	4324518.
GenomeReviews	Gene locus PAS2B in contig AP008207_GR.
KEGG	osa:4324518.
Organism-specific databases
Gramene	Q5ZEJ0.
Phylogenomic databases
HOGENOM	HBG736553.
Family and domain databases
InterPro	IPR007482. Tyr_Pase-like_PTPLA. [Graphical view]
PANTHER	PTHR11035. PTPLA. 1 hit.
Pfam	PF04387. PTPLA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

PAS2B_ORYSJ

Accession

Primary (citable) accession number: Q5ZEJ0
Secondary accession number(s): A2ZPA6

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 5, 2009
Last sequence update:	November 23, 2004
Last modified:	December 15, 2009
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

PPAP (Plant Proteome Annotation Project)