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Protein

Putative laccase-1

Gene

LAC1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Lignin degradation and detoxification of lignin-derived products.By similarity

Catalytic activityi

4 benzenediol + O2 = 4 benzosemiquinone + 2 H2O.

Cofactori

Cu cationBy similarityNote: Binds 4 Cu cations per monomer.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi87Copper 1By similarity1
Metal bindingi89Copper 2By similarity1
Metal bindingi132Copper 2By similarity1
Metal bindingi134Copper 3By similarity1
Metal bindingi478Copper 4By similarity1
Metal bindingi481Copper 1By similarity1
Metal bindingi483Copper 3By similarity1
Metal bindingi540Copper 3By similarity1
Metal bindingi541Copper 4By similarity1
Metal bindingi542Copper 2By similarity1
Metal bindingi546Copper 4By similarity1
Metal bindingi551Copper 4By similarity1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Biological processi

Lignin degradation

Keywords - Ligandi

Copper, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Putative laccase-1 (EC:1.10.3.2)
Alternative name(s):
Benzenediol:oxygen oxidoreductase 1
Diphenol oxidase 1
Urishiol oxidase 1
Gene namesi
Name:LAC1
Ordered Locus Names:Os01g0374600, LOC_Os01g27700
ORF Names:B1045D11.30, OsJ_001779
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 1

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 28Sequence analysisAdd BLAST28
ChainiPRO_000029188629 – 577Putative laccase-1Add BLAST549

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi42N-linked (GlcNAc...)Sequence analysis1
Glycosylationi83N-linked (GlcNAc...)Sequence analysis1
Glycosylationi115N-linked (GlcNAc...)Sequence analysis1
Glycosylationi276N-linked (GlcNAc...)Sequence analysis1
Glycosylationi304N-linked (GlcNAc...)Sequence analysis1
Glycosylationi382N-linked (GlcNAc...)Sequence analysis1
Glycosylationi402N-linked (GlcNAc...)Sequence analysis1

Keywords - PTMi

Glycoprotein

Expressioni

Gene expression databases

GenevisibleiQ5ZCW1. OS.

Structurei

3D structure databases

ProteinModelPortaliQ5ZCW1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini37 – 153Plastocyanin-like 1Add BLAST117
Domaini163 – 316Plastocyanin-like 2Add BLAST154
Domaini442 – 561Plastocyanin-like 3Add BLAST120

Sequence similaritiesi

Belongs to the multicopper oxidase family.Curated
Contains 3 plastocyanin-like domains.Curated

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

InParanoidiQ5ZCW1.
OrthoDBiEOG093606A1.

Family and domain databases

Gene3Di2.60.40.420. 3 hits.
InterProiIPR001117. Cu-oxidase.
IPR011706. Cu-oxidase_2.
IPR011707. Cu-oxidase_3.
IPR033138. Cu_oxidase_CS.
IPR002355. Cu_oxidase_Cu_BS.
IPR008972. Cupredoxin.
IPR017761. Laccase.
[Graphical view]
PfamiPF00394. Cu-oxidase. 1 hit.
PF07731. Cu-oxidase_2. 1 hit.
PF07732. Cu-oxidase_3. 1 hit.
[Graphical view]
SUPFAMiSSF49503. SSF49503. 4 hits.
TIGRFAMsiTIGR03389. laccase. 1 hit.
PROSITEiPS00079. MULTICOPPER_OXIDASE1. 1 hit.
PS00080. MULTICOPPER_OXIDASE2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5ZCW1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGTAKIPALL WFLLAGLVLA LAVNPAHGAK TRHYDFFITE TNYTRLCHEK
60 70 80 90 100
SILTVNGQFP GPTIYARKGD FIIVNVHNNG NKNITIHWHG VDQPRNPWSD
110 120 130 140 150
GPEFITQCPI RPGGNFTYQV ILFEEEGTLW WHAHSDFDRA TVHGAIVIHP
160 170 180 190 200
KRGTTFLFRK LDKEIPWWND DVEHVLDKAK RIGGDVEPSD TNTINGQPGD
210 220 230 240 250
MFPLCSRDDT FKVAVQQGNT YLLRVINAGL TNDMFFAIAG HRLTVVGIDA
260 270 280 290 300
RYTKPITVDY IMIAPGQTMD VLLKANRTLG SNSRYYMAAR TFITLPVDTI
310 320 330 340 350
RFNNSTATAI VEYTDSAVAR PVGPPEFPVL LPAIKDEDAA MAFVKQLRSL
360 370 380 390 400
GNQDHPVHVP KQVDEHMLID IDINFLPCDA NNATNKLCEG PQGNRFAASL
410 420 430 440 450
NNVSFQNPAI DVLDAYYYGS GRGVYEENFP NKLTVIVNPT GDINGGGPLL
460 470 480 490 500
TKRGTKVKVL EYGTVVEVVF QDLSIENHPM HLHGFTFYVV GRGSGTFDER
510 520 530 540 550
RDPATYNLID PPFQNTVSVP KSSWAAIRFR ADNPGVWFMH CHFDRHVVWG
560 570
MDTMFIVKDG KTPQAQMLPR PPNMPEC
Length:577
Mass (Da):64,530
Last modified:November 23, 2004 - v1
Checksum:iA803FB6E25D34495
GO

Sequence cautioni

The sequence BAF04988 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003199 Genomic DNA. Translation: BAD61379.1.
AP008207 Genomic DNA. Translation: BAF04988.2. Sequence problems.
AP014957 Genomic DNA. No translation available.
CM000138 Genomic DNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003199 Genomic DNA. Translation: BAD61379.1.
AP008207 Genomic DNA. Translation: BAF04988.2. Sequence problems.
AP014957 Genomic DNA. No translation available.
CM000138 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliQ5ZCW1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

InParanoidiQ5ZCW1.
OrthoDBiEOG093606A1.

Gene expression databases

GenevisibleiQ5ZCW1. OS.

Family and domain databases

Gene3Di2.60.40.420. 3 hits.
InterProiIPR001117. Cu-oxidase.
IPR011706. Cu-oxidase_2.
IPR011707. Cu-oxidase_3.
IPR033138. Cu_oxidase_CS.
IPR002355. Cu_oxidase_Cu_BS.
IPR008972. Cupredoxin.
IPR017761. Laccase.
[Graphical view]
PfamiPF00394. Cu-oxidase. 1 hit.
PF07731. Cu-oxidase_2. 1 hit.
PF07732. Cu-oxidase_3. 1 hit.
[Graphical view]
SUPFAMiSSF49503. SSF49503. 4 hits.
TIGRFAMsiTIGR03389. laccase. 1 hit.
PROSITEiPS00079. MULTICOPPER_OXIDASE1. 1 hit.
PS00080. MULTICOPPER_OXIDASE2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiLAC1_ORYSJ
AccessioniPrimary (citable) accession number: Q5ZCW1
Secondary accession number(s): A2ZTA7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: November 23, 2004
Last modified: September 7, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.