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Q5Z9Z0

- BGL24_ORYSJ

UniProt

Q5Z9Z0 - BGL24_ORYSJ

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Protein

Beta-glucosidase 24

Gene

BGLU24

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei47 – 471SubstrateBy similarity
Binding sitei151 – 1511SubstrateBy similarity
Binding sitei196 – 1961SubstrateBy similarity
Active sitei197 – 1971Proton donorBy similarity
Binding sitei340 – 3401SubstrateBy similarity
Active sitei411 – 4111NucleophileBy similarity
Binding sitei460 – 4601SubstrateBy similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 24 (EC:3.2.1.21)
Short name:
Os6bglu24
Gene namesi
Name:BGLU24
Ordered Locus Names:Os06g0320200, LOC_Os06g21570
ORF Names:OsJ_21154, P0592B08.35
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 6

Organism-specific databases

GrameneiQ5Z9Z0.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence AnalysisAdd
BLAST
Chaini19 – 504486Beta-glucosidase 24PRO_0000390341Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi75 – 751N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi216 ↔ 224By similarity
Glycosylationi329 – 3291N-linked (GlcNAc...)Sequence Analysis
Glycosylationi371 – 3711N-linked (GlcNAc...)Sequence Analysis
Glycosylationi421 – 4211N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Structurei

3D structure databases

ProteinModelPortaliQ5Z9Z0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni467 – 4682Substrate bindingBy similarity

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
InParanoidiQ5Z9Z0.
OMAiNERVERN.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5Z9Z0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MELLWLLLLL LMASSTSSRS EMKAGEVIRR SQFPEDFFFG TASSAYQYEG
60 70 80 90 100
AVREGGRGPS IWDTFTHNHP EKIANGSNGD IAIDSYHRYK EDVGIMKGLG
110 120 130 140 150
LNAYRFSVSW PRILPNGKLS GGVNLEGIKY YNNLIDELIS KGVEPFVTLF
160 170 180 190 200
HWDSPQALEQ QYGGFLSNLI VEDFRDYADI CFREFGDRVK YWITFNEPWS
210 220 230 240 250
FSIGGYSNGI LAPGRCSSQG KSGCSKGDSG REPYIVAHNQ LLAHAAVVQI
260 270 280 290 300
YREKYQGGQK GKIGIAIVSN WMIPYEDSKE DKHATKRALD FMYGWFMDPL
310 320 330 340 350
TKGDYPVSMR TLVGNRLPRF TKEQSKAING SFDFIGLNYY TARYIQGTKQ
360 370 380 390 400
DSNSHKSYST DSLTNERVER NGTDIGPKAG SSWLYIYPKG IEELLLYTKR
410 420 430 440 450
TYNNPTIYIT ENGVDEVNNE NLSLKEALID TTRIEFYRQH LFHVQRALRQ
460 470 480 490 500
GVDVRGYFAW SLFDNFEWMD GYSVRFGINY IDYKDGLKRY PKRSSQWLQN

FLHN
Length:504
Mass (Da):57,756
Last modified:November 23, 2004 - v1
Checksum:i7969915219899515
GO

Sequence cautioni

The sequence AK241587 differs from that shown. Reason: Frameshift at position 368. Curated
The sequence BAF19425.2 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003543 Genomic DNA. Translation: BAD61620.1.
AP008212 Genomic DNA. Translation: BAF19425.2. Sequence problems.
CM000143 Genomic DNA. Translation: EEE65609.1.
AK241587 mRNA. No translation available.
RefSeqiNP_001057511.2. NM_001064046.2.
UniGeneiOs.80436.

Genome annotation databases

GeneIDi4340890.
KEGGiosa:4340890.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003543 Genomic DNA. Translation: BAD61620.1 .
AP008212 Genomic DNA. Translation: BAF19425.2 . Sequence problems.
CM000143 Genomic DNA. Translation: EEE65609.1 .
AK241587 mRNA. No translation available.
RefSeqi NP_001057511.2. NM_001064046.2.
UniGenei Os.80436.

3D structure databases

ProteinModelPortali Q5Z9Z0.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4340890.
KEGGi osa:4340890.

Organism-specific databases

Gramenei Q5Z9Z0.

Phylogenomic databases

eggNOGi COG2723.
InParanoidi Q5Z9Z0.
OMAi NERVERN.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 1 hit.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "Oryza sativa full length cDNA."
    The rice full-length cDNA consortium
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  5. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
    Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
    BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL24_ORYSJ
AccessioniPrimary (citable) accession number: Q5Z9Z0
Secondary accession number(s): Q0DCJ8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: November 23, 2004
Last modified: October 29, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3