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Q5Z9Z0

- BGL24_ORYSJ

UniProt

Q5Z9Z0 - BGL24_ORYSJ

Protein

Beta-glucosidase 24

Gene

BGLU24

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (23 Nov 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei47 – 471SubstrateBy similarity
    Binding sitei151 – 1511SubstrateBy similarity
    Binding sitei196 – 1961SubstrateBy similarity
    Active sitei197 – 1971Proton donorBy similarity
    Binding sitei340 – 3401SubstrateBy similarity
    Active sitei411 – 4111NucleophileBy similarity
    Binding sitei460 – 4601SubstrateBy similarity

    GO - Molecular functioni

    1. beta-glucosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro
    2. glucosinolate metabolic process Source: EnsemblPlants/Gramene
    3. response to salt stress Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH1. Glycoside Hydrolase Family 1.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-glucosidase 24 (EC:3.2.1.21)
    Short name:
    Os6bglu24
    Gene namesi
    Name:BGLU24
    Ordered Locus Names:Os06g0320200, LOC_Os06g21570
    ORF Names:OsJ_21154, P0592B08.35
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 6

    Organism-specific databases

    GrameneiQ5Z9Z0.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 1818Sequence AnalysisAdd
    BLAST
    Chaini19 – 504486Beta-glucosidase 24PRO_0000390341Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi75 – 751N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi216 ↔ 224By similarity
    Glycosylationi329 – 3291N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi371 – 3711N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi421 – 4211N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Structurei

    3D structure databases

    ProteinModelPortaliQ5Z9Z0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni467 – 4682Substrate bindingBy similarity

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG2723.
    OMAiNERVERN.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 1 hit.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q5Z9Z0-1 [UniParc]FASTAAdd to Basket

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    MELLWLLLLL LMASSTSSRS EMKAGEVIRR SQFPEDFFFG TASSAYQYEG    50
    AVREGGRGPS IWDTFTHNHP EKIANGSNGD IAIDSYHRYK EDVGIMKGLG 100
    LNAYRFSVSW PRILPNGKLS GGVNLEGIKY YNNLIDELIS KGVEPFVTLF 150
    HWDSPQALEQ QYGGFLSNLI VEDFRDYADI CFREFGDRVK YWITFNEPWS 200
    FSIGGYSNGI LAPGRCSSQG KSGCSKGDSG REPYIVAHNQ LLAHAAVVQI 250
    YREKYQGGQK GKIGIAIVSN WMIPYEDSKE DKHATKRALD FMYGWFMDPL 300
    TKGDYPVSMR TLVGNRLPRF TKEQSKAING SFDFIGLNYY TARYIQGTKQ 350
    DSNSHKSYST DSLTNERVER NGTDIGPKAG SSWLYIYPKG IEELLLYTKR 400
    TYNNPTIYIT ENGVDEVNNE NLSLKEALID TTRIEFYRQH LFHVQRALRQ 450
    GVDVRGYFAW SLFDNFEWMD GYSVRFGINY IDYKDGLKRY PKRSSQWLQN 500
    FLHN 504
    Length:504
    Mass (Da):57,756
    Last modified:November 23, 2004 - v1
    Checksum:i7969915219899515
    GO

    Sequence cautioni

    The sequence AK241587 differs from that shown. Reason: Frameshift at position 368.
    The sequence BAF19425.2 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003543 Genomic DNA. Translation: BAD61620.1.
    AP008212 Genomic DNA. Translation: BAF19425.2. Sequence problems.
    CM000143 Genomic DNA. Translation: EEE65609.1.
    AK241587 mRNA. No translation available.
    RefSeqiNP_001057511.2. NM_001064046.2.
    UniGeneiOs.80436.

    Genome annotation databases

    GeneIDi4340890.
    KEGGiosa:4340890.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003543 Genomic DNA. Translation: BAD61620.1 .
    AP008212 Genomic DNA. Translation: BAF19425.2 . Sequence problems.
    CM000143 Genomic DNA. Translation: EEE65609.1 .
    AK241587 mRNA. No translation available.
    RefSeqi NP_001057511.2. NM_001064046.2.
    UniGenei Os.80436.

    3D structure databases

    ProteinModelPortali Q5Z9Z0.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH1. Glycoside Hydrolase Family 1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 4340890.
    KEGGi osa:4340890.

    Organism-specific databases

    Gramenei Q5Z9Z0.

    Phylogenomic databases

    eggNOGi COG2723.
    OMAi NERVERN.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. "Oryza sativa full length cDNA."
      The rice full-length cDNA consortium
      Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    5. "Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
      Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
      BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiBGL24_ORYSJ
    AccessioniPrimary (citable) accession number: Q5Z9Z0
    Secondary accession number(s): Q0DCJ8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 2009
    Last sequence update: November 23, 2004
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3