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Q5Z9Z0 (BGL24_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Beta-glucosidase 24

Short name=Os6bglu24
EC=3.2.1.21
Gene names
Name:BGLU24
Ordered Locus Names:Os06g0320200, LOC_Os06g21570
ORF Names:OsJ_21154, P0592B08.35
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length504 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sequence similarities

Belongs to the glycosyl hydrolase 1 family.

Sequence caution

The sequence AK241587 differs from that shown. Reason: Frameshift at position 368.

The sequence BAF19425.2 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMDisulfide bond
Glycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

glucosinolate metabolic process

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

response to salt stress

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionbeta-glucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1818 Potential
Chain19 – 504486Beta-glucosidase 24
PRO_0000390341

Regions

Region467 – 4682Substrate binding By similarity

Sites

Active site1971Proton donor By similarity
Active site4111Nucleophile By similarity
Binding site471Substrate By similarity
Binding site1511Substrate By similarity
Binding site1961Substrate By similarity
Binding site3401Substrate By similarity
Binding site4601Substrate By similarity

Amino acid modifications

Glycosylation751N-linked (GlcNAc...) Potential
Glycosylation3291N-linked (GlcNAc...) Potential
Glycosylation3711N-linked (GlcNAc...) Potential
Glycosylation4211N-linked (GlcNAc...) Potential
Disulfide bond216 ↔ 224 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q5Z9Z0 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: 7969915219899515

FASTA50457,756
        10         20         30         40         50         60 
MELLWLLLLL LMASSTSSRS EMKAGEVIRR SQFPEDFFFG TASSAYQYEG AVREGGRGPS 

        70         80         90        100        110        120 
IWDTFTHNHP EKIANGSNGD IAIDSYHRYK EDVGIMKGLG LNAYRFSVSW PRILPNGKLS 

       130        140        150        160        170        180 
GGVNLEGIKY YNNLIDELIS KGVEPFVTLF HWDSPQALEQ QYGGFLSNLI VEDFRDYADI 

       190        200        210        220        230        240 
CFREFGDRVK YWITFNEPWS FSIGGYSNGI LAPGRCSSQG KSGCSKGDSG REPYIVAHNQ 

       250        260        270        280        290        300 
LLAHAAVVQI YREKYQGGQK GKIGIAIVSN WMIPYEDSKE DKHATKRALD FMYGWFMDPL 

       310        320        330        340        350        360 
TKGDYPVSMR TLVGNRLPRF TKEQSKAING SFDFIGLNYY TARYIQGTKQ DSNSHKSYST 

       370        380        390        400        410        420 
DSLTNERVER NGTDIGPKAG SSWLYIYPKG IEELLLYTKR TYNNPTIYIT ENGVDEVNNE 

       430        440        450        460        470        480 
NLSLKEALID TTRIEFYRQH LFHVQRALRQ GVDVRGYFAW SLFDNFEWMD GYSVRFGINY 

       490        500 
IDYKDGLKRY PKRSSQWLQN FLHN 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[4]"Oryza sativa full length cDNA."
The rice full-length cDNA consortium
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[5]"Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP003543 Genomic DNA. Translation: BAD61620.1.
AP008212 Genomic DNA. Translation: BAF19425.2. Sequence problems.
CM000143 Genomic DNA. Translation: EEE65609.1.
AK241587 mRNA. No translation available.
RefSeqNP_001057511.2. NM_001064046.2.
UniGeneOs.80436.

3D structure databases

ProteinModelPortalQ5Z9Z0.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4340890.
KEGGosa:4340890.

Organism-specific databases

GrameneQ5Z9Z0.

Phylogenomic databases

eggNOGCOG2723.
OMAEVNQKAI.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBGL24_ORYSJ
AccessionPrimary (citable) accession number: Q5Z9Z0
Secondary accession number(s): Q0DCJ8
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: November 23, 2004
Last modified: April 16, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries