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Q5Z9P8

- GUN18_ORYSJ

UniProt

Q5Z9P8 - GUN18_ORYSJ

Protein

Endoglucanase 18

Gene

Os06g0715300

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (23 Nov 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei436 – 4361PROSITE-ProRule annotation
    Active sitei482 – 4821PROSITE-ProRule annotation
    Active sitei491 – 4911PROSITE-ProRule annotation

    GO - Molecular functioni

    1. cellulase activity Source: UniProtKB-EC

    GO - Biological processi

    1. cellulose catabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

    Protein family/group databases

    CAZyiGH9. Glycoside Hydrolase Family 9.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Endoglucanase 18 (EC:3.2.1.4)
    Alternative name(s):
    Endo-1,4-beta glucanase 18
    Gene namesi
    Ordered Locus Names:Os06g0715300, LOC_Os06g50140
    ORF Names:P0481E08.13
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 6

    Organism-specific databases

    GrameneiQ5Z9P8.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 518518Endoglucanase 18PRO_0000249295Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi71 – 711N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi214 – 2141N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi251 – 2511N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi272 – 2721N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi477 – 4771N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Structurei

    3D structure databases

    ProteinModelPortaliQ5Z9P8.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 3535CytoplasmicSequence AnalysisAdd
    BLAST
    Topological domaini57 – 518462ExtracellularSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei36 – 5621HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Signal-anchor, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG05134.
    HOGENOMiHOG000021033.
    OMAiTTYQDEL.

    Family and domain databases

    Gene3Di1.50.10.10. 1 hit.
    InterProiIPR008928. 6-hairpin_glycosidase-like.
    IPR012341. 6hp_glycosidase.
    IPR001701. Glyco_hydro_9.
    IPR018221. Glyco_hydro_9_AS.
    [Graphical view]
    PfamiPF00759. Glyco_hydro_9. 1 hit.
    [Graphical view]
    SUPFAMiSSF48208. SSF48208. 1 hit.
    PROSITEiPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5Z9P8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MANCVRCCCW LLVLMLMALA ITAAVVFVRY KNGEGVFPFP GVPGAVDHKY    50
    ADALAVALQF FQVQKSGKLV NNTIHWRGDS ALDDGKEAGI DLSKGMYDAG 100
    DHMKFGFPMA FTATMLSWSV LEYGDAMRAA DQRDSAIDAL NWIMDYLVNA 150
    HPSDDVLYIQ VGDPKADHKC WERPEKMKEK RPLTKITPKS PGSDVAAETA 200
    AAMAAASLVY KTINKTYSSS LLDHGERLFA FADKHRGSYT RTFPELSAFY 250
    NSTTYQDELL WAASWLYHAT GNHSYLAYAT GKNKDFADLG NPRYFSWDDK 300
    RAGTEVLLSR VSFFASQGSD VAQDDVLGMY KQTADAVMCI LLPDSETAAF 350
    RTEGGLLYVA EWNSLQHPVA SAFLAAVYSD YMQSSGKTEL SCSGQGFSPA 400
    DLRKFAKSQA DYLLGSNPMK ISYLVGYGDR YPEKVHHRGA SIPEDVDTGC 450
    DGHKWLETSK PNPNVATGAL VGGPYKNDSF VDERDNVMQN EATTYNSALV 500
    AGLLSALVST SSLARSLS 518
    Length:518
    Mass (Da):56,741
    Last modified:November 23, 2004 - v1
    Checksum:iF6DA8EC0D7951B8C
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti450 – 4501C → Y in AK121369. (PubMed:12869764)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003614 Genomic DNA. Translation: BAD53575.1.
    AP008212 Genomic DNA. Translation: BAF20497.1.
    AK121369 mRNA. No translation available.
    RefSeqiNP_001058583.1. NM_001065118.1.
    UniGeneiOs.50481.

    Genome annotation databases

    EnsemblPlantsiOS06T0715300-01; OS06T0715300-01; OS06G0715300.
    GeneIDi4342070.
    KEGGiosa:4342070.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003614 Genomic DNA. Translation: BAD53575.1 .
    AP008212 Genomic DNA. Translation: BAF20497.1 .
    AK121369 mRNA. No translation available.
    RefSeqi NP_001058583.1. NM_001065118.1.
    UniGenei Os.50481.

    3D structure databases

    ProteinModelPortali Q5Z9P8.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH9. Glycoside Hydrolase Family 9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS06T0715300-01 ; OS06T0715300-01 ; OS06G0715300 .
    GeneIDi 4342070.
    KEGGi osa:4342070.

    Organism-specific databases

    Gramenei Q5Z9P8.

    Phylogenomic databases

    eggNOGi NOG05134.
    HOGENOMi HOG000021033.
    OMAi TTYQDEL.

    Family and domain databases

    Gene3Di 1.50.10.10. 1 hit.
    InterProi IPR008928. 6-hairpin_glycosidase-like.
    IPR012341. 6hp_glycosidase.
    IPR001701. Glyco_hydro_9.
    IPR018221. Glyco_hydro_9_AS.
    [Graphical view ]
    Pfami PF00759. Glyco_hydro_9. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48208. SSF48208. 1 hit.
    PROSITEi PS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiGUN18_ORYSJ
    AccessioniPrimary (citable) accession number: Q5Z9P8
    Secondary accession number(s): Q0D9H6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 5, 2006
    Last sequence update: November 23, 2004
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3