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Q5Z9P8 (GUN18_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Endoglucanase 18

EC=3.2.1.4
Alternative name(s):
Endo-1,4-beta glucanase 18
Gene names
Ordered Locus Names:Os06g0715300, LOC_Os06g50140
ORF Names:P0481E08.13
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length518 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Subcellular location

Membrane; Single-pass type II membrane protein.

Sequence similarities

Belongs to the glycosyl hydrolase 9 (cellulase E) family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 518518Endoglucanase 18
PRO_0000249295

Regions

Topological domain1 – 3535Cytoplasmic Potential
Transmembrane36 – 5621Helical; Potential
Topological domain57 – 518462Extracellular Potential

Sites

Active site4361 By similarity
Active site4821 By similarity
Active site4911 By similarity

Amino acid modifications

Glycosylation711N-linked (GlcNAc...) Potential
Glycosylation2141N-linked (GlcNAc...) Potential
Glycosylation2511N-linked (GlcNAc...) Potential
Glycosylation2721N-linked (GlcNAc...) Potential
Glycosylation4771N-linked (GlcNAc...) Potential

Experimental info

Sequence conflict4501C → Y in AK121369. Ref.3

Sequences

Sequence LengthMass (Da)Tools
Q5Z9P8 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: F6DA8EC0D7951B8C

FASTA51856,741
        10         20         30         40         50         60 
MANCVRCCCW LLVLMLMALA ITAAVVFVRY KNGEGVFPFP GVPGAVDHKY ADALAVALQF 

        70         80         90        100        110        120 
FQVQKSGKLV NNTIHWRGDS ALDDGKEAGI DLSKGMYDAG DHMKFGFPMA FTATMLSWSV 

       130        140        150        160        170        180 
LEYGDAMRAA DQRDSAIDAL NWIMDYLVNA HPSDDVLYIQ VGDPKADHKC WERPEKMKEK 

       190        200        210        220        230        240 
RPLTKITPKS PGSDVAAETA AAMAAASLVY KTINKTYSSS LLDHGERLFA FADKHRGSYT 

       250        260        270        280        290        300 
RTFPELSAFY NSTTYQDELL WAASWLYHAT GNHSYLAYAT GKNKDFADLG NPRYFSWDDK 

       310        320        330        340        350        360 
RAGTEVLLSR VSFFASQGSD VAQDDVLGMY KQTADAVMCI LLPDSETAAF RTEGGLLYVA 

       370        380        390        400        410        420 
EWNSLQHPVA SAFLAAVYSD YMQSSGKTEL SCSGQGFSPA DLRKFAKSQA DYLLGSNPMK 

       430        440        450        460        470        480 
ISYLVGYGDR YPEKVHHRGA SIPEDVDTGC DGHKWLETSK PNPNVATGAL VGGPYKNDSF 

       490        500        510 
VDERDNVMQN EATTYNSALV AGLLSALVST SSLARSLS 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP003614 Genomic DNA. Translation: BAD53575.1.
AP008212 Genomic DNA. Translation: BAF20497.1.
AK121369 mRNA. No translation available.
RefSeqNP_001058583.1. NM_001065118.1.
UniGeneOs.50481.

3D structure databases

ProteinModelPortalQ5Z9P8.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH9. Glycoside Hydrolase Family 9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS06T0715300-01; OS06T0715300-01; OS06G0715300.
GeneID4342070.
KEGGosa:4342070.

Organism-specific databases

GrameneQ5Z9P8.

Phylogenomic databases

eggNOGNOG05134.
HOGENOMHOG000021033.
OMATTYQDEL.

Family and domain databases

Gene3D1.50.10.10. 1 hit.
InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMSSF48208. SSF48208. 1 hit.
PROSITEPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGUN18_ORYSJ
AccessionPrimary (citable) accession number: Q5Z9P8
Secondary accession number(s): Q0D9H6
Entry history
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: November 23, 2004
Last modified: May 14, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries