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Protein

Probable protein phosphatase 2C 60

Gene

Os06g0717800

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi86 – 861Manganese 1By similarity
Metal bindingi86 – 861Manganese 2By similarity
Metal bindingi87 – 871Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi287 – 2871Manganese 2By similarity
Metal bindingi346 – 3461Manganese 2By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 60 (EC:3.1.3.16)
Short name:
OsPP2C60
Gene namesi
Ordered Locus Names:Os06g0717800, LOC_Os06g50380
ORF Names:OJ1540_H01.4, P0541C02.17
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
ProteomesiUP000000763 Componenti: Chromosome 6

Organism-specific databases

GrameneiQ5Z8P0.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei145 – 16521HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 392392Probable protein phosphatase 2C 60PRO_0000363307Add
BLAST

Expressioni

Gene expression databases

ExpressionAtlasiQ5Z8P0. baseline.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os06g50380.1.

Structurei

3D structure databases

ProteinModelPortaliQ5Z8P0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini47 – 355309PPM-type phosphatasePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PPM-type phosphatase domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000238703.
InParanoidiQ5Z8P0.
OMAiVHELQPH.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR015655. PP2C.
IPR000222. PP2C_BS.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PPM_1. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5Z8P0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIVTLMNLLR ACWRPSSNQH ARAGSDVAGR QDGLLWYKDT GQHVNGEFSM
60 70 80 90 100
AVVQANNLLE DQCQIESGPL SFLDSGPYGT FVGVYDGHGG PETACYINDH
110 120 130 140 150
LFHHLKRFAS EQNSISADVL KKAYEATEDG FFSVVTKQWP VKPQIAAVGS
160 170 180 190 200
CCLVGVICGG ILYVANVGDS RVVLGRHVKA TGEVLAVQLS AEHNVSIESV
210 220 230 240 250
RKELQSMHPE DRHIVVLKHN VWRVKGLIQV CRSIGDAYLK RSEFNREPLY
260 270 280 290 300
AKFRLREPFH KPILSSEPSI SVQPLQPHDQ FLIFASDGLW EHLTNQEAVD
310 320 330 340 350
IVHSSPRNGS ARRLIKAALQ EAAKKREMRY SDLKKIDRGV RRHFHDDITV
360 370 380 390
IVVFLDSSLV SRASTYRGPS VSLRGGGVNL RSNTLAPYAS QM
Length:392
Mass (Da):43,579
Last modified:November 23, 2004 - v1
Checksum:i37023B35CE45B19B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091774 Genomic DNA. Translation: AAL79731.1.
AP003769 Genomic DNA. Translation: BAD61722.1.
AP008212 Genomic DNA. Translation: BAF20511.1.
AK064885 mRNA. Translation: BAG89257.1.
AK121514 mRNA. Translation: BAH00528.1.
RefSeqiNP_001058597.1. NM_001065132.1.
UniGeneiOs.8512.

Genome annotation databases

EnsemblPlantsiOS06T0717800-01; OS06T0717800-01; OS06G0717800.
OS06T0717800-02; OS06T0717800-02; OS06G0717800.
GeneIDi4342084.
KEGGiosa:4342084.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091774 Genomic DNA. Translation: AAL79731.1.
AP003769 Genomic DNA. Translation: BAD61722.1.
AP008212 Genomic DNA. Translation: BAF20511.1.
AK064885 mRNA. Translation: BAG89257.1.
AK121514 mRNA. Translation: BAH00528.1.
RefSeqiNP_001058597.1. NM_001065132.1.
UniGeneiOs.8512.

3D structure databases

ProteinModelPortaliQ5Z8P0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os06g50380.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS06T0717800-01; OS06T0717800-01; OS06G0717800.
OS06T0717800-02; OS06T0717800-02; OS06G0717800.
GeneIDi4342084.
KEGGiosa:4342084.

Organism-specific databases

GrameneiQ5Z8P0.

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000238703.
InParanoidiQ5Z8P0.
OMAiVHELQPH.

Gene expression databases

ExpressionAtlasiQ5Z8P0. baseline.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR015655. PP2C.
IPR000222. PP2C_BS.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PPM_1. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  4. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C60_ORYSJ
AccessioniPrimary (citable) accession number: Q5Z8P0
Secondary accession number(s): Q8SB31
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: November 23, 2004
Last modified: June 24, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.