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Q5Z7L0

- BGAL9_ORYSJ

UniProt

Q5Z7L0 - BGAL9_ORYSJ

Protein

Beta-galactosidase 9

Gene

Os06g0573600

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (23 Nov 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei178 – 1781Proton donorSequence Analysis
    Active sitei247 – 2471NucleophileSequence Analysis

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Protein family/group databases

    CAZyiGH35. Glycoside Hydrolase Family 35.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidase 9 (EC:3.2.1.23)
    Short name:
    Lactase 9
    Gene namesi
    Ordered Locus Names:Os06g0573600, LOC_Os06g37560
    ORF Names:OSJNBa0006A22.31-1
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 6

    Organism-specific databases

    GrameneiQ5Z7L0.

    Subcellular locationi

    GO - Cellular componenti

    1. apoplast Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Apoplast, Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2020Sequence AnalysisAdd
    BLAST
    Chaini21 – 715695Beta-galactosidase 9PRO_0000294161Add
    BLAST

    Proteomic databases

    PRIDEiQ5Z7L0.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5Z7L0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 35 family.Curated

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG1874.
    OMAiNSIINTC.

    Family and domain databases

    Gene3Di2.60.120.260. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR008979. Galactose-bd-like.
    IPR019801. Glyco_hydro_35_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR001944. Glycoside_Hdrlase_35.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR23421. PTHR23421. 1 hit.
    PfamiPF01301. Glyco_hydro_35. 1 hit.
    [Graphical view]
    PRINTSiPR00742. GLHYDRLASE35.
    SUPFAMiSSF49785. SSF49785. 2 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q5Z7L0-1 [UniParc]FASTAAdd to Basket

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    MSGGAVAFLL LVAAAAVANA AVTYDHRSLT INGQRRILIS GSIHYPRSTP    50
    EMWPDLIQKA KDGGLDVIQT YVFWNGHEPV QGQYYFSDRY DLVRFVKLVK 100
    QAGLYVNLRI GPYVCAEWNY GGFPVWLKYV PGISFRTDNG PFKAAMQTFV 150
    EKIVSMMKSE GLFEWQGGPI ILAQVENEYG PMESVMGSGA KSYVDWAAKM 200
    AVATNAGVPW IMCKQDDAPD PVINTCNGFY CDDFTPNSKN KPSMWTEAWS 250
    GWFTAFGGTV PQRPVEDLAF AVARFIQKGG SFINYYMYHG GTNFDRTAGG 300
    PFIATSYDYD APIDEYGLLR QPKWGHLTNL HKAIKQAETA LVAGDPTVQN 350
    IGNYEKAYVF RSSSGDCAAF LSNFHTSAAA RVAFNGRRYD LPAWSISVLP 400
    DCRTAVYNTA TVTAASSPAK MNPAGGFTWQ SYGEATNSLD ETAFTKDGLV 450
    EQLSMTWDKS DYLWYTTYVN IDSGEQFLKS GQWPQLTVYS AGHSVQVFVN 500
    GQYFGNAYGG YDGPKLTYSG YVKMWQGSNK ISILSSAVGL PNVGTHYETW 550
    NIGVLGPVTL SGLNEGKRDL SKQKWTYQIG LKGEKLGVHS VSGSSSVEWG 600
    GAAGKQPVTW HRAYFNAPAG GAPVALDLGS MGKGQAWVNG HLIGRYWSYK 650
    ASGNCGGCSY AGTYSEKKCQ ANCGDASQRW YHVPRSWLNP SGNLVVLLEE 700
    FGGDLSGVTL MTRTT 715
    Length:715
    Mass (Da):78,280
    Last modified:November 23, 2004 - v1
    Checksum:i828368E0725B61B2
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti26 – 261H → R in AK102756. (PubMed:12869764)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004729 Genomic DNA. Translation: BAD61846.1.
    AP008212 Genomic DNA. Translation: BAF19834.1.
    AK102756 mRNA. No translation available.
    RefSeqiNP_001057920.1. NM_001064455.1.
    UniGeneiOs.87715.

    Genome annotation databases

    EnsemblPlantsiOS06T0573600-01; OS06T0573600-01; OS06G0573600.
    GeneIDi4341358.
    KEGGiosa:4341358.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004729 Genomic DNA. Translation: BAD61846.1 .
    AP008212 Genomic DNA. Translation: BAF19834.1 .
    AK102756 mRNA. No translation available.
    RefSeqi NP_001057920.1. NM_001064455.1.
    UniGenei Os.87715.

    3D structure databases

    ProteinModelPortali Q5Z7L0.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH35. Glycoside Hydrolase Family 35.

    Proteomic databases

    PRIDEi Q5Z7L0.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS06T0573600-01 ; OS06T0573600-01 ; OS06G0573600 .
    GeneIDi 4341358.
    KEGGi osa:4341358.

    Organism-specific databases

    Gramenei Q5Z7L0.

    Phylogenomic databases

    eggNOGi COG1874.
    OMAi NSIINTC.

    Family and domain databases

    Gene3Di 2.60.120.260. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR008979. Galactose-bd-like.
    IPR019801. Glyco_hydro_35_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR001944. Glycoside_Hdrlase_35.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR23421. PTHR23421. 1 hit.
    Pfami PF01301. Glyco_hydro_35. 1 hit.
    [Graphical view ]
    PRINTSi PR00742. GLHYDRLASE35.
    SUPFAMi SSF49785. SSF49785. 2 hits.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS01182. GLYCOSYL_HYDROL_F35. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiBGAL9_ORYSJ
    AccessioniPrimary (citable) accession number: Q5Z7L0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 10, 2007
    Last sequence update: November 23, 2004
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3