Q5Z5C9 (BURPB_ORYSJ) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 32.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: BURP domain-containing protein 11 Short name=OsBURP11 | ||||||
| Gene names |
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| Organism | Oryza sativa subsp. japonica (Rice) [Reference proteome] | ||||||
| Taxonomic identifier | 39947 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza › ![]() |
Protein attributes
| Sequence length | 328 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Tissue specificity | Expressed in roots. Ref.4 |
| Sequence similarities | Contains 1 BURP domain. |
| Caution | Lacks the conserved signal peptide, which is one of the features of the BURP domain-containing proteins. |
| Sequence caution | The sequence BAF19373.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
| Keywords | |
|---|---|
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [2] | "The rice annotation project database (RAP-DB): 2008 update." The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare. |
| [3] | "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice." The rice full-length cDNA consortium Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Nipponbare. |
| [4] | "Genome-wide identification of BURP domain-containing genes in rice reveals a gene family with diverse structures and responses to abiotic stresses." Ding X., Hou X., Xie K., Xiong L. Planta 230:149-163(2009) [PubMed] [Europe PMC] [Abstract] Cited for: TISSUE SPECIFICITY, GENE NOMENCLATURE. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AP004007 Genomic DNA. Translation: BAD53988.1. AP005748 Genomic DNA. Translation: BAD62094.1. AP008212 Genomic DNA. Translation: BAF19373.1. Sequence problems. AK106070 mRNA. No translation available. |
| RefSeq | NP_001174738.1. NM_001187809.1. |
| UniGene | Os.54595. |
3D structure databases | |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 9268400. |
| KEGG | dosa:Os06t0302000-01. osa:9268400. |
Organism-specific databases | |
| Gramene | Q5Z5C9. |
Phylogenomic databases | |
| eggNOG | NOG330760. |
| HOGENOM | HOG000082614. |
Gene expression databases | |
| ArrayExpress | Q5Z5C9. |
Family and domain databases | |
| InterPro | IPR004873. BURP_dom. [Graphical view] |
| Pfam | PF03181. BURP. 1 hit. [Graphical view] |
| PROSITE | PS51277. BURP. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | BURPB_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q5Z5C9 Secondary accession number(s): Q0DCQ0 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Plant Protein Annotation Program | ||||||||
Relevant documents
| Oryza sativa (rice) Index of Oryza sativa entries and their corresponding gene designations |
| SIMILARITY comments Index of protein domains and families |

Clusters with
