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Unreviewed, UniProtKB/TrEMBL Q5Z0M5 (Q5Z0M5_NOCFA)

Last modified March 2, 2010. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information
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Names and originHide

Protein namesRecommended name:
ATP-dependent Clp protease proteolytic subunit RuleBase RU003567V1
Gene names
Name:clp3 EMBL BAD56016.1
Ordered Locus Names:NFA_11710
OrganismNocardia farcinica [Complete proteome] [HAMAP]
Taxonomic identifier37329 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia
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Protein attributesHide

Sequence length201 AA.
Sequence statusComplete.
Protein existenceInferred from homology.
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General annotation (Comments)Hide

Sequence similarities

Belongs to the peptidase S14 family. RuleBase RU003567V1

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OntologiesHide

Keywords
   Molecular functionHydrolase
Protease EMBL BAD56016.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processproteolysis

Inferred from electronic annotation. Source: InterPro

   Molecular functionserine-type endopeptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...
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SequencesHide

Sequence LengthMass (Da)Tools
Q5Z0M5-1 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: E41CB7BEFEB409B0

FASTA20121,775
        10         20         30         40         50         60 
MAHDDKTPLF GWRAREQLLS RRILVLDGPL DDDNGTLLAT QLLTLAAEND EAPISLWIHS 

        70         80         90        100        110        120 
PGGSVPAMLA IRDVMRLVPC EVSTLALGLA CSAGQFLLSA GSRGKRFALP HARVLMHQGS 

       130        140        150        160        170        180 
AGIGGTAVDV EVQADDLRHT VETVLGLIAA DTGQPYDRIY EDSLHDRWFT AAQAKEYGFI 

       190        200 
DHIVDSFGQV VPQRPRVGIT L

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ReferencesHide

[1]"The complete genomic sequence of Nocardia farcinica IFM 10152."
Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M.
Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IFM 10152.
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Cross-referencesHide

Sequence databases

EMBL
GenBank
DDBJ		AP006618 Genomic DNA. Translation: BAD56016.1.
RefSeqYP_117380.1.

3D structure databases

SMRQ5Z0M5. Positions 16-186.
ModBaseSearch...

Genome annotation databases

GeneID3109837.
GenomeReviewsGene locus NFA_11710 in contig AP006618_GR.
KEGGnfa:nfa11710.
NMPDRfig|247156.1.peg.1203.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG558421.
OMADPRADIS.
ProtClustDBCLSK2523668.

Enzyme and pathway databases

BioCycNFAR247156:NFA11710-MONOMER.

Family and domain databases

InterProIPR001907. Pept_S14_ClpP.
[Graphical view]
PANTHERPTHR10381. Pept_S14_ClpP. 1 hit.
PfamPF00574. CLP_protease. 1 hit.
[Graphical view]
PRINTSPR00127. CLPPROTEASEP.
ProtoNetSearch...
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Entry informationHide

Entry nameQ5Z0M5_NOCFA
AccessionPrimary (citable) accession number: Q5Z0M5
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: March 2, 2010
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information