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Protein
Submitted name:

Putative aminotransferase

Gene

NFA_14400

Organism
Nocardia farcinica (strain IFM 10152)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW
  3. transferase activity, transferring phosphorus-containing groups Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciNFAR247156:GJ9T-1474-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative aminotransferaseImported
Gene namesi
Ordered Locus Names:NFA_14400Imported
OrganismiNocardia farcinica (strain IFM 10152)Imported
Taxonomic identifieri247156 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia
ProteomesiUP000006820: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi247156.nfa14400.

Structurei

3D structure databases

ProteinModelPortaliQ5YZV6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

OMAiDPDIDIW.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR005814. Aminotrans_3.
IPR011009. Kinase-like_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR004147. UbiB_dom.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF03109. ABC1. 1 hit.
PF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
SSF56112. SSF56112. 2 hits.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5YZV6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLKHLARAGV LSARGAAEYS LAALRDRDPA SRDRRRAEAV LDFLVRMGPI
60 70 80 90 100
YIKMGQIAAT RSDLFGPDWV STLRVLQDQT PHMTAAQSRR AVERELGRPL
110 120 130 140 150
TQVFRRFDAE PVASASVAQV HVAELLDGRK VAVKLVKDGV PEQIEESLKS
160 170 180 190 200
IATLLRLLNR ATPRLRELDV ATRFDEIARL LRPQADMTHE AAQQRRIHAN
210 220 230 240 250
FAGHPYVTVP AVLDELVTSR MLVMQFMDGI PGKRVEEVGF PRDQLARRLQ
260 270 280 290 300
DVIYTMLYMH GVCHGDPHPG NVMFGPTGEL ILLDYGVTVE LTEDEKWGLS
310 320 330 340 350
SFYYACTRKE WHNAIDRFTR YFVLADEKLH RNRAAYDAEM AEVLRYHFDI
360 370 380 390 400
SSSQWSTISY FNDVSAVLRK YDSRYTTNFT KVELVFLSCE GFASQIDPDI
410 420 430 440 450
DIWANARRFT DRYSPYMSAE VEARFAAGFA EQMPTSLRLR DRAQATLVAP
460 470 480 490 500
THIDRYFFPS GFPVFVESAA GGRVRDFDGN DYLDLSGGYG PHLLGYGHPA
510 520 530 540 550
ITEAITTGVR RGLVNGIGNP GEIELAEQLV RAFPAADKAV LCNSGTEAIL
560 570 580 590 600
FAIRMARGYR RRATVAKFEG HYHGFSDQGM VSSWFRFSGD RHRPDPVAGS
610 620 630 640 650
QGVDPATVAN TVVMQYGDLD GLARIREHAD ELACVILEPM PTSVVALNVE
660 670 680 690 700
FLTALRGLCT ELDIPLIFDE VVSGFRVAYG GVQVLADVHP DLTCLGKVIG
710 720 730 740 750
GGLPCGAVVG RAELIDTAKS SQDPFYDYEN KVFAGGTLSG NSLTCAAGLA
760 770 780 790 800
VLRHLDAHRE IYDELESNTQ RLAGMLREAT AQREIACRIN ASRSIFSLNF
810 820 830 840 850
SHRAAGLYRD RMAGSNFKAT IALAYYMRKH QVYLPELHSF LISAAHTTED
860 870
LDQIAHAFDK SLDEMLADNL FVL
Length:873
Mass (Da):97,163
Last modified:November 23, 2004 - v1
Checksum:i8F16F1431C6B168F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006618 Genomic DNA. Translation: BAD56285.1.
RefSeqiYP_117649.1. NC_006361.1.

Genome annotation databases

EnsemblBacteriaiBAD56285; BAD56285; NFA_14400.
GeneIDi3106617.
KEGGinfa:nfa14400.
PATRICi22732508. VBINocFar94200_1502.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006618 Genomic DNA. Translation: BAD56285.1.
RefSeqiYP_117649.1. NC_006361.1.

3D structure databases

ProteinModelPortaliQ5YZV6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi247156.nfa14400.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD56285; BAD56285; NFA_14400.
GeneIDi3106617.
KEGGinfa:nfa14400.
PATRICi22732508. VBINocFar94200_1502.

Phylogenomic databases

OMAiDPDIDIW.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciNFAR247156:GJ9T-1474-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR005814. Aminotrans_3.
IPR011009. Kinase-like_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
IPR004147. UbiB_dom.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF03109. ABC1. 1 hit.
PF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
SSF56112. SSF56112. 2 hits.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: IFM 10152Imported.

Entry informationi

Entry nameiQ5YZV6_NOCFA
AccessioniPrimary (citable) accession number: Q5YZV6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: January 7, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.