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Q5YZV6

- Q5YZV6_NOCFA

UniProt

Q5YZV6 - Q5YZV6_NOCFA

Protein
Submitted name:

Putative aminotransferase

Gene

NFA_14400

Organism
Nocardia farcinica (strain IFM 10152)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 73 (01 Oct 2014)
      Sequence version 1 (23 Nov 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    (S)-4-amino-5-oxopentanoate = 5-aminolevulinate.

    GO - Molecular functioni

    1. pyridoxal phosphate binding Source: InterPro
    2. transaminase activity Source: UniProtKB-KW
    3. transferase activity, transferring phosphorus-containing groups Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciNFAR247156:GJ9T-1474-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative aminotransferaseImported
    Gene namesi
    Ordered Locus Names:NFA_14400Imported
    OrganismiNocardia farcinica (strain IFM 10152)Imported
    Taxonomic identifieri247156 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeNocardia
    ProteomesiUP000006820: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi247156.nfa14400.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5YZV6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    OMAiDPDIDIW.
    OrthoDBiEOG6QVRHN.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 2 hits.
    InterProiIPR005814. Aminotrans_3.
    IPR011009. Kinase-like_dom.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    IPR004147. UbiB_dom.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF03109. ABC1. 1 hit.
    PF00202. Aminotran_3. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    SSF56112. SSF56112. 2 hits.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5YZV6-1 [UniParc]FASTAAdd to Basket

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    MLKHLARAGV LSARGAAEYS LAALRDRDPA SRDRRRAEAV LDFLVRMGPI    50
    YIKMGQIAAT RSDLFGPDWV STLRVLQDQT PHMTAAQSRR AVERELGRPL 100
    TQVFRRFDAE PVASASVAQV HVAELLDGRK VAVKLVKDGV PEQIEESLKS 150
    IATLLRLLNR ATPRLRELDV ATRFDEIARL LRPQADMTHE AAQQRRIHAN 200
    FAGHPYVTVP AVLDELVTSR MLVMQFMDGI PGKRVEEVGF PRDQLARRLQ 250
    DVIYTMLYMH GVCHGDPHPG NVMFGPTGEL ILLDYGVTVE LTEDEKWGLS 300
    SFYYACTRKE WHNAIDRFTR YFVLADEKLH RNRAAYDAEM AEVLRYHFDI 350
    SSSQWSTISY FNDVSAVLRK YDSRYTTNFT KVELVFLSCE GFASQIDPDI 400
    DIWANARRFT DRYSPYMSAE VEARFAAGFA EQMPTSLRLR DRAQATLVAP 450
    THIDRYFFPS GFPVFVESAA GGRVRDFDGN DYLDLSGGYG PHLLGYGHPA 500
    ITEAITTGVR RGLVNGIGNP GEIELAEQLV RAFPAADKAV LCNSGTEAIL 550
    FAIRMARGYR RRATVAKFEG HYHGFSDQGM VSSWFRFSGD RHRPDPVAGS 600
    QGVDPATVAN TVVMQYGDLD GLARIREHAD ELACVILEPM PTSVVALNVE 650
    FLTALRGLCT ELDIPLIFDE VVSGFRVAYG GVQVLADVHP DLTCLGKVIG 700
    GGLPCGAVVG RAELIDTAKS SQDPFYDYEN KVFAGGTLSG NSLTCAAGLA 750
    VLRHLDAHRE IYDELESNTQ RLAGMLREAT AQREIACRIN ASRSIFSLNF 800
    SHRAAGLYRD RMAGSNFKAT IALAYYMRKH QVYLPELHSF LISAAHTTED 850
    LDQIAHAFDK SLDEMLADNL FVL 873
    Length:873
    Mass (Da):97,163
    Last modified:November 23, 2004 - v1
    Checksum:i8F16F1431C6B168F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006618 Genomic DNA. Translation: BAD56285.1.
    RefSeqiYP_117649.1. NC_006361.1.

    Genome annotation databases

    EnsemblBacteriaiBAD56285; BAD56285; NFA_14400.
    GeneIDi3106617.
    KEGGinfa:nfa14400.
    PATRICi22732508. VBINocFar94200_1502.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006618 Genomic DNA. Translation: BAD56285.1 .
    RefSeqi YP_117649.1. NC_006361.1.

    3D structure databases

    ProteinModelPortali Q5YZV6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 247156.nfa14400.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD56285 ; BAD56285 ; NFA_14400 .
    GeneIDi 3106617.
    KEGGi nfa:nfa14400.
    PATRICi 22732508. VBINocFar94200_1502.

    Phylogenomic databases

    OMAi DPDIDIW.
    OrthoDBi EOG6QVRHN.

    Enzyme and pathway databases

    BioCyci NFAR247156:GJ9T-1474-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 2 hits.
    InterProi IPR005814. Aminotrans_3.
    IPR011009. Kinase-like_dom.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    IPR004147. UbiB_dom.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF03109. ABC1. 1 hit.
    PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    SSF56112. SSF56112. 2 hits.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: IFM 10152Imported.

    Entry informationi

    Entry nameiQ5YZV6_NOCFA
    AccessioniPrimary (citable) accession number: Q5YZV6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 23, 2004
    Last sequence update: November 23, 2004
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3