Q5YZ97 (Q5YZ97_NOCFA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Proline iminopeptidase RuleBase RU003421
EC=3.4.11.5 RuleBase RU003421

Gene names

Ordered Locus Names:

NFA_16480

Organism

Nocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP]

Taxonomic identifier

247156 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia

Protein attributes

Sequence length	322 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Release of N-terminal proline from a peptide. RuleBase RU003421
Sequence similarities	Belongs to the peptidase S33 family. RuleBase RU003421

Ontologies

Keywords
Molecular function	Aminopeptidase RuleBase RU003421 Hydrolase Protease
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	aminopeptidase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	116	1	Nucleophile By similarity PIRSR PIRSR006431-1
	Active site	272	1	By similarity PIRSR PIRSR006431-1
	Active site	300	1	Proton donor By similarity PIRSR PIRSR006431-1

Sequences

	Sequence		Length	Mass (Da)
	Q5YZ97 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 3A8A4F985A635967	FASTA	322	36,020
	10 20 30 40 50 60 MMRRELYPPI EPFDSGMLDV GDGQRVYWEV SGNPEGKPVV FLHGGPGGGT APLHRRFFDP 70 80 90 100 110 120 ACYRIVLFDQ RGCGRSTPHI ADGADLSVNT TWHLVADIEA LREHLGVERW QVFGGSWGST 130 140 150 160 170 180 LALAYAQRHP ERVTEMVLRG VFLLRRKEID WYYNGAAGYV YPDEWEKFLA PVPAGERDGD 190 200 210 220 230 240 LVAAYHRLLH SPDPAVVERA AVAWSVWEGS TSSLLPHPDR VAETAEPRFA IAFARIENHY 250 260 270 280 290 300 FRHGGFLAEG QLLRDIDRIA HLPVEIVQGR HDIVCPAVSA WELHRAWPGS RLHIVDDAGH 310 320 AANEPGIVHH LVEATDRFAK EG

References

[1]

"The complete genomic sequence of Nocardia farcinica IFM 10152." Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M. Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IFM 10152.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006618 Genomic DNA. Translation: BAD56494.1.
RefSeq	YP_117858.1. NC_006361.1.
3D structure databases
ProteinModelPortal	Q5YZ97.
SMR	Q5YZ97. Positions 4-319.
ModBase	Search...
Protein family/group databases
MEROPS	S33.001.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3107392.
GenomeReviews	Gene locus NFA_16480 in contig AP006618_GR.
KEGG	nfa:nfa16480.
NMPDR	fig|247156.1.peg.1666.
PATRIC	22732904. VBINocFar94200_1697.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG677789.
OMA	AELDWYY.
Family and domain databases
InterPro	IPR000073. AB_hydrolase_1. IPR005944. Pept_S33. IPR002410. Peptidase_S33. [Graphical view]
KO	K01259.
PANTHER	PTHR10992:SF12. PTHR10992:SF12. 1 hit.
Pfam	PF00561. Abhydrolase_1. 1 hit. [Graphical view]
PIRSF	PIRSF006431. Pept_S33. 1 hit.
PRINTS	PR00111. ABHYDROLASE. PR00793. PROAMNOPTASE.
TIGRFAMs	TIGR01249. Pro_imino_pep_1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5YZ97_NOCFA

Accession

Primary (citable) accession number: Q5YZ97

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	December 14, 2011
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)