Q5YY82 (Q5YY82_NOCFA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
GTPase Der RuleBase RU004481

Gene names

Ordered Locus Names:

NFA_20130

Organism

Nocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP]

Taxonomic identifier

247156 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia

Protein attributes

Sequence length	472 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	GTPase that plays an essential role in the late steps of ribosome biogenesis By similarity. RuleBase RU004481
Sequence similarities	Belongs to the Era/MnmE GTP-binding protein family. Der subfamily. RuleBase RU004481

Ontologies

Keywords
Domain	Repeat RuleBase RU004481
Ligand	GTP-binding RuleBase RU004481 Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	GTP binding Inferred from electronic annotation. Source: UniProtKB-KW nucleoside-triphosphatase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5YY82 [UniParc]. Last modified November 23, 2004. Version 1. Checksum: 52859ADB24D4570B	FASTA	472	51,573
	10 20 30 40 50 60 MSEDVLAGDG VWSDESDWEI ADLEGEQEGE AQQAMPTLAV VGRPNVGKST LVNRILGRRE 70 80 90 100 110 120 AVVEDIPGVT RDRVSYEATW AGRRFLVQDT GGWEPDAKGL QQAVARQAEL AMATADAILL 130 140 150 160 170 180 VVDATVGATA TDEAAVKKLR RSQIPVILVA NKVDDQRLEA EAAALWSLGL GEPRMVSAAH 190 200 210 220 230 240 GRGTGDLLDD VLEVLPETPR EGTGGTGPRR VALVGKPNVG KSSLLNKLAG DERSVVHDVA 250 260 270 280 290 300 GTTVDPVDSL VELGGKIWKF VDTAGLRRKV SNASGTEFYA SLRTKSALEA SEVAIMLIDA 310 320 330 340 350 360 SQPITEQDLR VISLVADSGR ALVLAFNKWD LVDEDRRLQL EKEVDRELVR VPWAQRVNIS 370 380 390 400 410 420 AHTGRAVQKL VPAMETALES WDKRISTGRL NNWLKEVVAA TPPPMRGGRL PRVLFATQAA 430 440 450 460 470 TRPPTFVLFT TGFLEAGYRR FLERRLREEF GFDGSPVRIS VRVREKRERG RK

References

[1]

"The complete genomic sequence of Nocardia farcinica IFM 10152." Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M. Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed: 15466710] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: IFM 10152.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP006618 Genomic DNA. Translation: BAD56859.1.
RefSeq	YP_118223.1. NC_006361.1.
3D structure databases
ProteinModelPortal	Q5YY82.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3108001.
GenomeReviews	Gene locus NFA_20130 in contig AP006618_GR.
KEGG	nfa:nfa20130.
NMPDR	fig|247156.1.peg.2016.
PATRIC	22733650. VBINocFar94200_2063.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG592135.
OMA	QGADFYA.
ProtClustDB	PRK03003.
Family and domain databases
HAMAP	MF_00195. GTPase_Der. [Tree]
InterPro	IPR003593. ATPase_AAA+_core. IPR016484. GTP-bd_EngA. IPR006073. GTP_binding_domain. IPR015946. KH_dom-like_a/b. IPR005225. Small_GTP-bd_dom. [Graphical view]
Gene3D	G3DSA:3.30.300.20. KH_prok. 1 hit.
KO	K03977.
PANTHER	PTHR11649:SF5. PTHR11649:SF5. 1 hit.
Pfam	PF01926. MMR_HSR1. 2 hits. [Graphical view]
PIRSF	PIRSF006485. GTP-binding_EngA. 1 hit.
PRINTS	PR00326. GTP1OBG.
SMART	SM00382. AAA. 2 hits. [Graphical view]
TIGRFAMs	TIGR03594. GTPase_EngA. 1 hit. TIGR00231. Small_GTP. 2 hits.
ProtoNet	Search...

Entry information

Entry name

Q5YY82_NOCFA

Accession

Primary (citable) accession number: Q5YY82

Entry history

Integrated into UniProtKB/TrEMBL:	November 23, 2004
Last sequence update:	November 23, 2004
Last modified:	January 25, 2012
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)