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Q5YX51 (Q5YX51_NOCFA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative sugar isomerase EMBL BAD57240.1
Gene names
Ordered Locus Names:NFA_23930 EMBL BAD57240.1
OrganismNocardia farcinica (strain IFM 10152) [Complete proteome] [HAMAP] EMBL BAD57240.1
Taxonomic identifier247156 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Nocardia ›

Protein attributes

Sequence length205 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionIsomerase EMBL BAD57240.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

isomerase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5YX51 [UniParc].

Last modified November 23, 2004. Version 1.
Checksum: C5B36ACFDBF043D4

FASTA20521,715
        10         20         30         40         50         60 
MTSSKVQSTR HLVPGTGAEL ERHFDALSNA LRRNLSPAVA HIWTWGEELA RVYQRGGRLF 

        70         80         90        100        110        120 
TCGNGGSAAE AQHLSAELTG RFRGERQPLS AIALHCDTSS TTAIVNDYGI DEMFARQLRA 

       130        140        150        160        170        180 
HGRPGDVLVV LSTSGSSPNV VAAAKAAHDI GMATWAMTGP PPNPLAALCD DAVAIEADTV 

       190        200 
ATVQEMHLVL VHALCTALEA ALEVR

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References

[1]"The complete genomic sequence of Nocardia farcinica IFM 10152."
Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M.
Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IFM 10152 EMBL BAD57240.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP006618 Genomic DNA. Translation: BAD57240.1.
RefSeqYP_118604.1. NC_006361.1.

3D structure databases

ProteinModelPortalQ5YX51.
ModBaseSearch...

Protein-protein interaction databases

STRING247156.nfa23930.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD57240; BAD57240; NFA_23930.
GeneID3106700.
KEGGnfa:nfa23930.
PATRIC22734400. VBINocFar94200_2437.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03271.
OMAPHIEQAS.

Enzyme and pathway databases

BioCycNFAR247156:GJ9T-2440-MONOMER.

Family and domain databases

InterProIPR001347. SIS.
[Graphical view]
PfamPF13580. SIS_2. 1 hit.
[Graphical view]
PROSITEPS51464. SIS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5YX51_NOCFA
AccessionPrimary (citable) accession number: Q5YX51
Entry history
Integrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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